pgugger / LandscapeGenomicsLinks
Tutorials for bioinformatics and data analysis related to landscape genomics
☆30Updated 7 years ago
Alternatives and similar repositories for LandscapeGenomics
Users that are interested in LandscapeGenomics are comparing it to the libraries listed below
Sorting:
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆69Updated 3 months ago
- Methods for examining PCA locally along the genome.☆87Updated last year
- Shiny apps for teaching Population Genetics☆67Updated 2 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆44Updated 6 years ago
- ☆44Updated 3 years ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- Repository for speciation genomics website☆27Updated 5 months ago
- This tutorial is a guide to perform TWAS with the data used in Torres‐Rodríguez, J. Vladimir, et al. "Population‐level gene expression ca…☆22Updated last month
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆31Updated 4 months ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 3 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago
- Get the consensus sequences from SAM (and BAM) files, ignoring the reference☆13Updated 6 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Updated 3 months ago
- UCE Bioinformatics Pipeline☆17Updated 4 months ago
- Population genetics analyses from NGS data☆26Updated 4 years ago
- Detecting natural selection from population-based genetic data☆28Updated 6 years ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆23Updated last year
- Suit of R-scripts to perform landscape genomic analyses☆13Updated 5 years ago
- Pinpoints the mutation favored by selection☆34Updated 4 years ago
- a bash pipeline for RAD sequencing☆55Updated last year
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆21Updated 6 years ago
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall, Fernando Seixas and Joana Meier from the Wellcome Sanger Institute☆65Updated last week
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆43Updated 2 years ago
- GWAS software that can handle autopolyploids☆32Updated 3 months ago
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- Genetic maps in autopolyploids☆31Updated 2 weeks ago
- Presentations from the course☆39Updated 2 years ago
- Estimate recombination rates from population genetic data☆71Updated 5 years ago