bcm-uga / pcadaptLinks
Performing highly efficient genome scans for local adaptation with R package pcadapt v4
☆42Updated last month
Alternatives and similar repositories for pcadapt
Users that are interested in pcadapt are comparing it to the libraries listed below
Sorting:
- ☆30Updated this week
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Module for analysing admixture graphs☆28Updated 7 years ago
- ☆43Updated 5 months ago
- An R package for reproducible and automated ADMIXTOOLS analyses☆33Updated 6 months ago
- ☆11Updated 3 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated last month
- microhaplotype visualizer and analyzer☆19Updated 4 years ago
- Population assignment analysis using R☆18Updated last month
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- deep learning prediction of geographic location from individual genome sequences☆51Updated 7 months ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- Automated and distributed population genetic model inference from allele frequency spectra☆18Updated 2 weeks ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆21Updated 9 months ago
- A package for population structure inference from RAD-seq data☆33Updated 4 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆29Updated 4 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- BITE: BioInformatics tools for everyone☆21Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆60Updated 10 months ago
- ☆30Updated 2 years ago
- ☆17Updated 9 years ago
- Simple and flexible manipulation of genomic data.☆16Updated 4 months ago
- SNP genotyping in polyploids☆17Updated 5 years ago
- Software for ancestry estimation in unrelated individuals☆20Updated last week
- A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop☆15Updated 5 years ago
- Genetic maps in autopolyploids☆29Updated 3 months ago