Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
☆17Feb 19, 2022Updated 4 years ago
Alternatives and similar repositories for BayesAss3-SNPs
Users that are interested in BayesAss3-SNPs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Population assignment analysis using R☆15Jul 4, 2025Updated 10 months ago
- A reliable gap filling pipeline for draft genomes☆11Sep 17, 2019Updated 6 years ago
- ☆13Aug 18, 2023Updated 2 years ago
- An R function to compute Concordance Factors from SNP datasets☆16Dec 4, 2025Updated 5 months ago
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Sep 4, 2019Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 7 years ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆30Jan 19, 2019Updated 7 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Population and Evolutionary Genetics Analysis System☆29Apr 4, 2026Updated last month
- Open Plant Pathology website☆21Oct 1, 2024Updated last year
- Repository containing a method for automatically identifying pathogen lineages from a phylogeny.☆17May 19, 2023Updated 2 years ago
- Advanced Vegan Workshop for ESA☆18Aug 7, 2017Updated 8 years ago
- Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests.☆14Jul 19, 2023Updated 2 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Sep 10, 2025Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆20Jun 15, 2024Updated last year
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆30Sep 27, 2019Updated 6 years ago
- method for modeling continuous and discrete population genetic structure☆38Jan 8, 2024Updated 2 years ago
- Estimation of per-individual inbreeding coefficients under a probabilistic framework☆22Aug 8, 2023Updated 2 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 7 months ago
- ☆10Dec 20, 2022Updated 3 years ago
- deep learning prediction of geographic location from individual genome sequences☆52Jan 20, 2025Updated last year
- simple examples of using supervised machine learning for population genetics inference☆39Oct 26, 2017Updated 8 years ago
- initial commit☆26Dec 29, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Phylogenetic Clustering (Phyloclustering)☆10Sep 6, 2023Updated 2 years ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆186Dec 19, 2024Updated last year
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- ☆12Feb 16, 2025Updated last year
- Simple scripts for concatenate alignments and rename terminals for phylogenetics☆22Sep 20, 2022Updated 3 years ago
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆16Oct 12, 2024Updated last year
- to hold low and medium resolution data used by rnaturalearth☆13Feb 28, 2025Updated last year
- Collection of Python scripts for parsing/analyses of RAD-seq data☆25Mar 20, 2026Updated last month
- Simple and flexible manipulation of genomic data.☆16Apr 16, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆39May 21, 2024Updated last year
- A collection of usefull tools for RAD or GBS data analysis☆33Mar 14, 2025Updated last year
- Importing and Analysing DArT type snp and silicodart data☆36Mar 27, 2025Updated last year
- Module for analysing admixture graphs☆28Apr 30, 2018Updated 8 years ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆15Aug 11, 2023Updated 2 years ago
- STICI source code☆26Jan 13, 2026Updated 3 months ago
- A statistical framework for ploidy estimation using NGS short-read data☆62Apr 5, 2018Updated 8 years ago