bbanbury / phrynomicsLinks
A collection of R code for dealing with SNP data and analyses
☆24Updated 2 years ago
Alternatives and similar repositories for phrynomics
Users that are interested in phrynomics are comparing it to the libraries listed below
Sorting:
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- ☆30Updated 2 years ago
- Population assignment analysis using R☆16Updated 3 months ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Updated 3 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- Simple and flexible manipulation of genomic data.☆16Updated 5 months ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆21Updated 10 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Module for analysing admixture graphs☆28Updated 7 years ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated 6 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆42Updated 2 months ago
- Fast and simple simulation-based population genetic inference in R☆26Updated 3 months ago
- ☆26Updated 4 years ago
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆16Updated last year
- Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)☆10Updated 5 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- Methods for examining PCA locally along the genome.☆83Updated last year
- Genome-wide de novo genotyping with 2bRAD☆23Updated 4 months ago
- ☆17Updated 9 years ago
- This repository contains the code and manual for the R package delimitR.☆17Updated 3 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆63Updated 11 months ago
- An R Package to build and simulate coalescent models☆20Updated 3 weeks ago
- microhaplotype visualizer and analyzer☆20Updated 4 years ago
- initial commit☆26Updated 2 years ago
- ☆31Updated 3 weeks ago
- ☆44Updated 6 months ago
- Phylogenetic penalized likelihood☆52Updated 3 months ago
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated last month
- Detecting natural selection from population-based genetic data☆28Updated 6 years ago