champost / ABLE
ABLE - Approximate Blockwise Likelihood Estimation
☆17Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for ABLE
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 5 years ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆12Updated 6 months ago
- Analyze and simulate Pool-Seq time series data☆15Updated 2 years ago
- ☆17Updated 8 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆23Updated 5 years ago
- Population genetics analyses from NGS data☆25Updated 3 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- SNP/Genotype calling based on ANGSD && downstream analyses☆9Updated 9 years ago
- Scripts for population genetics analysis☆19Updated 2 years ago
- A genome-wide IM blockwise likelihood estimation toolkit☆15Updated 4 months ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆15Updated 4 years ago
- Collection of Python scripts for parsing/analyses of RAD-seq data☆22Updated 3 years ago
- Genome-wide scan for balancing selection using beta statistic☆27Updated last year
- An R package to detect selection in biological pathways☆14Updated 10 months ago
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆14Updated last month
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆17Updated 5 years ago
- Code and binaries related to processing haplotagging data☆13Updated 2 years ago
- Likelihood-based Selective Sweep Detection☆35Updated last year
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆13Updated last year
- Tools to convert to and from vcf format☆14Updated 7 years ago
- General purpose population genetics software☆12Updated 5 years ago
- Population assignment analysis using R☆17Updated 2 weeks ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- Tutorial on using popular tools for learning about population history☆49Updated 6 years ago
- Estimating repeat spectra and genome length from low-coverage genome skims☆11Updated last year
- ☆12Updated 6 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆39Updated 5 years ago
- Tools for inference of the DFE with dadi☆14Updated 3 years ago