harrisonlab / popgenLinks
Population genetics analyses
☆23Updated 5 years ago
Alternatives and similar repositories for popgen
Users that are interested in popgen are comparing it to the libraries listed below
Sorting:
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 6 years ago
- Scripts and resources for the haploblocks manuscript☆16Updated 5 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 2 years ago
- ☆17Updated 9 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- ☆30Updated last month
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆51Updated 2 weeks ago
- ☆43Updated 2 months ago
- ☆24Updated 7 years ago
- Tools and Utilities for msmc and msmc2☆47Updated last year
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆20Updated 5 years ago
- Repository for speciation genomics website☆25Updated 10 months ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 4 years ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Software for ancestry estimation in unrelated individuals☆20Updated 3 weeks ago
- Codes for the lettuce resequencing project in 2020☆30Updated 3 years ago
- ☆16Updated 3 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 3 months ago
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last month
- Transposable element polymorphism identification☆33Updated 4 years ago
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Scripts for population genetics analysis☆20Updated 2 years ago