Multisample Variant Format ToolKit
☆10Oct 12, 2021Updated 4 years ago
Alternatives and similar repositories for mvftools
Users that are interested in mvftools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Dec 2, 2015Updated 10 years ago
- De-novo Assembly Structural Variant Caller☆13Sep 15, 2016Updated 9 years ago
- Fast, Accurate, and Complete SSR Detection in Genomic Sequences☆11Jun 29, 2020Updated 5 years ago
- Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.☆32Sep 19, 2022Updated 3 years ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆15May 2, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆20Sep 10, 2020Updated 5 years ago
- Utilities for analyzing next generation sequencing data☆17Sep 28, 2018Updated 7 years ago
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- The Ross-Ibarra's lab documentation☆26Aug 4, 2022Updated 3 years ago
- ☆20Apr 13, 2022Updated 4 years ago
- ☆15Jun 12, 2020Updated 5 years ago
- Population genetics analyses☆23Oct 10, 2019Updated 6 years ago
- Reconstruction of ancestral genome maps☆16Mar 29, 2018Updated 8 years ago
- Pipeline for structural variation detection in cohorts☆52Sep 14, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Jan 17, 2020Updated 6 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Apr 12, 2024Updated 2 years ago
- Population genetics analyses from NGS data☆27Mar 8, 2021Updated 5 years ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- convert a blast output to a bed file☆12Jun 19, 2015Updated 10 years ago
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- Tools for identifying introgressed archaic sequence.☆12Jun 20, 2017Updated 8 years ago
- R Package for performing Qst-Fst analyses☆21Nov 14, 2017Updated 8 years ago
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 4 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆68Dec 5, 2022Updated 3 years ago
- Workflow and script for converting genomic coordinates using MUMmer output and CrossMap☆12Sep 1, 2018Updated 7 years ago
- GenMap - Fast and Exact Computation of Genome Mappability☆115Jun 20, 2024Updated last year
- Fast calculations of linkage-disequilibrium in large-scale human cohorts☆44Nov 9, 2019Updated 6 years ago
- Deleterious mutation prediction pipeline☆13Dec 16, 2024Updated last year
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆33Nov 28, 2023Updated 2 years ago
- SMRT-SV: Structural variant and indel caller for PacBio reads☆28Feb 21, 2019Updated 7 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Feb 15, 2020Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆24Jun 9, 2017Updated 8 years ago
- Pipeline in place at the UGI for DNA level analysis☆11Aug 29, 2016Updated 9 years ago
- ☆12Sep 6, 2019Updated 6 years ago
- ✏️ Genome assembly polishing & SNV detection☆73Apr 1, 2026Updated 2 weeks ago
- 🗻 Visualization of genome/gene sequence synteny☆42Dec 13, 2023Updated 2 years ago
- Scripts used in the annotation of B10K genomes☆15Jun 1, 2020Updated 5 years ago
- Hapmap-v1☆12Feb 3, 2020Updated 6 years ago