Multisample Variant Format ToolKit
☆10Oct 12, 2021Updated 4 years ago
Alternatives and similar repositories for mvftools
Users that are interested in mvftools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Dec 2, 2015Updated 10 years ago
- De-novo Assembly Structural Variant Caller☆13Sep 15, 2016Updated 10 years ago
- Fast, Accurate, and Complete SSR Detection in Genomic Sequences☆11Jun 29, 2020Updated 6 years ago
- Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.☆31Sep 19, 2022Updated 4 years ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆16May 2, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Rescale genetic polymorphism data to match a common sample size.☆15Nov 4, 2021Updated 4 years ago
- ☆22Sep 10, 2020Updated 6 years ago
- Utilities for analyzing next generation sequencing data☆17Sep 28, 2018Updated 7 years ago
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- The Ross-Ibarra's lab documentation☆27Aug 4, 2022Updated 4 years ago
- ☆16Jun 12, 2020Updated 6 years ago
- Population genetics analyses☆23Oct 10, 2019Updated 6 years ago
- ☆20Apr 13, 2022Updated 4 years ago
- Reconstruction of ancestral genome maps☆16Mar 29, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- LDna: an R package to perform linkage disequilibrium network analysis☆31Apr 12, 2024Updated 2 years ago
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- Pipeline for structural variation detection in cohorts☆52Sep 14, 2021Updated 5 years ago
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Jan 17, 2020Updated 6 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- This repository contains the latest version of the HomeRange data and R package.☆12Apr 17, 2025Updated last year
- Population genetics analyses from NGS data☆27Mar 8, 2021Updated 5 years ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- convert a blast output to a bed file☆12Jun 19, 2015Updated 11 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Trend And PeAkS (TAPAS) analysis of temporal series (e.g. paleoecological records) to assess long-term trend and detect events (and event…☆15Aug 19, 2024Updated 2 years ago
- GenMap - Fast and Exact Computation of Genome Mappability☆124Jun 20, 2024Updated 2 years ago
- Tools for identifying introgressed archaic sequence.☆12Jun 20, 2017Updated 9 years ago
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 5 years ago
- Workflow and script for converting genomic coordinates using MUMmer output and CrossMap☆12Jun 15, 2026Updated 3 months ago
- ☆73Dec 5, 2022Updated 3 years ago
- Fast calculations of linkage-disequilibrium in large-scale human cohorts☆44Nov 9, 2019Updated 6 years ago
- Deleterious mutation prediction pipeline☆13Dec 16, 2024Updated last year
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆34Nov 28, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- 40k Data Card Assets☆18Jul 23, 2020Updated 6 years ago
- PSMC-based Migration and Split Time Inference (MiSTI) from two genomes☆12Mar 20, 2026Updated 6 months ago
- SMRT-SV: Structural variant and indel caller for PacBio reads☆28Feb 21, 2019Updated 7 years ago
- Pipeline in place at the UGI for DNA level analysis☆12Aug 29, 2016Updated 10 years ago
- ☆24Jun 9, 2017Updated 9 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Feb 15, 2020Updated 6 years ago
- 🗻 Visualization of genome/gene sequence synteny☆42Dec 13, 2023Updated 2 years ago