Cibiv / TeaserLinks
A tool to benchmark mappers and different parameters within minutes
☆44Updated 6 years ago
Alternatives and similar repositories for Teaser
Users that are interested in Teaser are comparing it to the libraries listed below
Sorting:
- An awk-like VCF parser☆56Updated last year
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Updated last year
- High-performance error correction for Illumina resequencing data☆73Updated 9 years ago
- ☆78Updated 11 years ago
- UCSC Nanopore☆43Updated 6 years ago
- Support Vector Structural Variation Genotyper☆58Updated 5 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆53Updated 7 years ago
- Structural Variant Index☆75Updated 9 months ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆57Updated 3 weeks ago
- Mapped QC analysis program☆44Updated 7 years ago
- Read visualizer for structural variants☆84Updated 7 years ago
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆106Updated 4 years ago
- 10x Genomics Reads Simulator☆45Updated last year
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- A read extraction and realignment tool for next generation sequencing data☆103Updated 2 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆49Updated 4 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- ☆82Updated 3 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 4 years ago
- Pipeline for structural variation detection in cohorts☆51Updated 4 years ago
- Tools for analyzing 10X Genomics data☆42Updated 6 years ago
- Automatically optimise three of Velvet's assembly parameters.☆48Updated 2 years ago