Applying IDR analysis to Homer peaks.
☆15May 8, 2020Updated 5 years ago
Alternatives and similar repositories for homer-idr
Users that are interested in homer-idr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 11 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- MUltiScale enrIchment Calling for ChIP-Seq Datasets☆23Mar 14, 2019Updated 7 years ago
- Rcount: simple and flexible RNA-Seq read counting☆12May 19, 2022Updated 3 years ago
- Ritornello is a high fidelity control free ChIP-seq peak calling algorithm☆13Aug 23, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Download binary executables and sample data here:☆18Oct 28, 2016Updated 9 years ago
- SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis☆25Apr 7, 2015Updated 10 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Oct 8, 2021Updated 4 years ago
- A fast and efficient short read mapper☆13Nov 7, 2021Updated 4 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Mar 14, 2026Updated 2 weeks ago
- AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality …☆11Mar 1, 2022Updated 4 years ago
- Chromatin segmentation in R☆19Feb 4, 2018Updated 8 years ago
- Q ChIP-seq peak caller☆18Jul 17, 2024Updated last year
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Enriched Domain Detector for ChIP-seq data☆16Aug 17, 2022Updated 3 years ago
- gvcf aggregation tool☆12Feb 7, 2018Updated 8 years ago
- Simple and quick FastQ and FastA tool for file reading and conversion☆17Jul 11, 2014Updated 11 years ago
- RNA-Seq Unified Mapper☆27Sep 9, 2022Updated 3 years ago
- ☆12Jan 21, 2016Updated 10 years ago
- NGS perl modules☆10Updated this week
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Apr 19, 2016Updated 9 years ago
- IDR☆175Sep 18, 2018Updated 7 years ago
- Example scripts for analyzing CUT&RUN datasets☆13Oct 3, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 6 years ago
- example applications built using bíogo☆18Apr 19, 2021Updated 4 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32May 31, 2016Updated 9 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 4 months ago
- Gordon's Text utils Library☆10Apr 11, 2022Updated 3 years ago
- TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/☆37Aug 2, 2021Updated 4 years ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 8 years ago
- Targeted Amplicon Bisulfite Sequencing Analysis Tool☆11May 8, 2019Updated 6 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Jun 13, 2025Updated 9 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Estimation of pairwise distances under a probabilistic framework☆11Aug 11, 2023Updated 2 years ago
- Peakzilla is a self-learning algorithm to identify transcription factor binding sites from ChIP-seq data. I would be very happy if you tr…☆21Aug 18, 2025Updated 7 months ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Oct 17, 2016Updated 9 years ago
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- ☆13Jan 8, 2020Updated 6 years ago
- DeeNA Zip (SAM/BAM compression tool)☆13May 25, 2019Updated 6 years ago
- JAMM Peak Finder for Sequencing Datasets☆30Mar 12, 2020Updated 6 years ago