sfu-compbio / deezLinks
DeeNA Zip (SAM/BAM compression tool)
☆13Updated 6 years ago
Alternatives and similar repositories for deez
Users that are interested in deez are comparing it to the libraries listed below
Sorting:
- Mapping-free variant caller for short-read Illumina data☆19Updated 5 years ago
- de Bruijn Graph-based read aligner☆33Updated 6 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- Toolkit for extracting SVs from long sequences and benchmarking variant callers☆13Updated 8 years ago
- Hemang Parikh☆11Updated 9 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- Population-scale detection of novel sequence insertions☆27Updated 2 years ago
- A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)☆13Updated 7 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- A software for discovery, genotyping and characterization of structural variants☆22Updated 10 months ago
- Integrated Variant Caller☆17Updated 7 years ago
- ☆26Updated 4 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 5 months ago
- Hidden Markov Model based Copy number caller☆20Updated 8 months ago
- Graph based multi genome aligner☆47Updated 3 years ago
- ☆11Updated 2 years ago
- my PhD thesis☆36Updated 6 years ago
- ☆37Updated 4 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- TREDPARSE: HLI Short Tandem Repeat (STR) caller☆25Updated 4 years ago
- a string to graph aligner☆41Updated 9 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 8 years ago
- Simple and quick FastQ and FastA tool for file reading and conversion☆17Updated 11 years ago
- Population-wide Deletion Calling☆35Updated 3 months ago
- laSV is a software package that employs local assembly to detect structural variations from whole-genome high-throughput sequencing datas…☆12Updated 8 years ago
- Identification of structural variations☆12Updated 3 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago