☆20Mar 31, 2021Updated 5 years ago
Alternatives and similar repositories for SARS-CoV-2_workshop
Users that are interested in SARS-CoV-2_workshop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed spe…☆18May 4, 2026Updated 4 months ago
- ☆13Jun 21, 2017Updated 9 years ago
- Kmer Analysis of Pileups for Genotyping☆42Jul 16, 2026Updated 2 months ago
- A tool set to assess the quality of the per read phasing and reduce the errors.☆13Jun 25, 2020Updated 6 years ago
- A tool to benchmark mappers and different parameters within minutes☆45Jul 2, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- pangenome analyses for complete genomes of great apes (and gibbon)☆21Oct 12, 2024Updated last year
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 5 months ago
- ☆13May 2, 2018Updated 8 years ago
- ☆11Jul 13, 2018Updated 8 years ago
- Tests Allelic Expression data for extreme imbalance w.r.t. population☆11Oct 8, 2021Updated 4 years ago
- Parakit is a tool to analyze the RCCX module, which contain the CYP21A2 gene, using long sequencing reads.☆18Jun 29, 2026Updated 3 months ago
- A script to re-color a FigTree saved Nexus file☆13Jan 29, 2017Updated 9 years ago
- A variant caller for the GBA gene using WGS data☆23Jul 31, 2024Updated 2 years ago
- ☆11Nov 24, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 3 years ago
- A fast, user-friendly analysis and evaluation toolkit for some DNA sequence classification tasks☆15Sep 22, 2018Updated 8 years ago
- ☆45Jul 16, 2026Updated 2 months ago
- genetic distance plotting for recombination events analysis☆10Jul 14, 2026Updated 2 months ago
- ☆13Feb 29, 2024Updated 2 years ago
- Embed TikTok Videos in R Markdown☆19Jan 14, 2021Updated 5 years ago
- Scripts to score and find the optimal guess in Wordle https://www.tiktok.com/@crvlwanek/video/7057703711862377775?is_copy_url=1&is_from_w…☆11Jan 29, 2022Updated 4 years ago
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Aug 14, 2023Updated 3 years ago
- ☆16Jun 30, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Reference-guided multiple sequence alignment of viral genomes☆72Updated this week
- Influenza genome analysis Nextflow workflow☆33Sep 15, 2025Updated last year
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 9 years ago
- Metagenomic Analysis☆11Apr 5, 2021Updated 5 years ago
- SARS-CoV-2 Deep Sequencing☆14Apr 22, 2020Updated 6 years ago
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 4 years ago
- ☆36Mar 2, 2021Updated 5 years ago
- open source bagel recipe; let's raise the quality of bagels worldwide☆29Nov 3, 2024Updated last year
- A Python package for microbiome sequencing analysis with QIIME 2☆46Jan 28, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆23Sep 21, 2021Updated 5 years ago
- Nanopore plasmid pipeline (FAST5 basecalling, assembly, plasmid identification and antimicrobial resistance genes identification).☆13Apr 20, 2021Updated 5 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 10 months ago
- Embed excel file as an excel-alike table into sphinx documentation☆13Aug 20, 2017Updated 9 years ago
- A tool for motif annotation and visualization in tandem repeats.☆15May 26, 2025Updated last year
- PharmGKB NGS Pipeline☆19Oct 2, 2018Updated 8 years ago
- ☆16Oct 3, 2017Updated 9 years ago