Additional tools for analyzing Oxford Nanopore minION data
☆17Jul 24, 2015Updated 11 years ago
Alternatives and similar repositories for poreminion
Users that are interested in poreminion are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- ☆12Jan 21, 2016Updated 10 years ago
- Experimental pipeline for correcting nanopore reads☆39May 23, 2017Updated 9 years ago
- UCSC Nanopore☆43Aug 11, 2019Updated 7 years ago
- Software for Nanopore Analysis☆10Mar 14, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Simple and quick FastQ and FastA tool for file reading and conversion☆17Jul 11, 2014Updated 12 years ago
- example applications built using bíogo☆18Apr 19, 2021Updated 5 years ago
- Programs and documentation for the SAMSA pipeline, version 1.0☆16Dec 16, 2019Updated 6 years ago
- 16S rRNA database☆13Nov 29, 2018Updated 7 years ago
- Gordon's Text utils Library☆10Apr 11, 2022Updated 4 years ago
- ☆11Dec 3, 2013Updated 12 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 11 months ago
- Analysis tool for Nanopore sequencing data☆34Apr 15, 2019Updated 7 years ago
- Romulus: Robust multi-state identification of transcription factor binding sites from DNase-seq data☆10Mar 6, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- ☆18Mar 5, 2017Updated 9 years ago
- de Bruijn Graph REAd mapping Tool☆14Jul 12, 2017Updated 9 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 5 months ago
- Compressive Read-mapping Accelerator☆14Sep 7, 2016Updated 10 years ago
- To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be co…☆31Dec 26, 2023Updated 2 years ago
- multi-tool QC for minion data☆11May 28, 2018Updated 8 years ago
- An alignment tool for optical mapping data☆10May 29, 2020Updated 6 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Apr 19, 2016Updated 10 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- NGS perl modules☆10Oct 29, 2026Updated last week
- AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality …☆11Mar 1, 2022Updated 4 years ago
- ☆13Sep 11, 2025Updated last year
- Pacbio sequence alignment tool, please use "git clone" to copy and use the repository☆18Feb 17, 2019Updated 7 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Apr 23, 2016Updated 10 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Nov 25, 2017Updated 8 years ago
- A tool to analyze synteny at the protein level.☆14Mar 28, 2018Updated 8 years ago
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 10 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Wrappers around NGS peak callers to both call peaks and run IDR☆11Aug 2, 2013Updated 13 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆11Updated this week
- Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis☆18Nov 2, 2022Updated 4 years ago
- Quality control plotting for long reads☆10May 14, 2024Updated 2 years ago
- Rcount: simple and flexible RNA-Seq read counting☆12May 19, 2022Updated 4 years ago
- Analysis toolkit and programming library for k-mer profiles☆30Mar 11, 2021Updated 5 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Oct 11, 2018Updated 8 years ago