olapuentesantana / easier_manuscript
☆15Updated 3 years ago
Alternatives and similar repositories for easier_manuscript:
Users that are interested in easier_manuscript are comparing it to the libraries listed below
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆13Updated 2 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆23Updated 2 years ago
- Computational identification of targets for CAR-T cell therapy in AML☆16Updated 2 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- ☆22Updated 2 years ago
- ☆45Updated 6 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆39Updated 11 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 3 months ago
- ☆17Updated 4 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆14Updated 2 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- ☆22Updated 4 months ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆20Updated last year
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- Single-Cell Inference of Class Switch Recombination☆18Updated 6 months ago
- ☆31Updated 9 months ago
- ☆21Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆25Updated 4 months ago
- ☆16Updated 2 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated last year
- Implementation of MaSigPro for scRNA-Seq Data☆14Updated 6 months ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆15Updated last year
- ☆9Updated 5 months ago
- ☆16Updated last year