olapuentesantana / easier_manuscriptLinks
☆15Updated 3 years ago
Alternatives and similar repositories for easier_manuscript
Users that are interested in easier_manuscript are comparing it to the libraries listed below
Sorting:
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 4 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 months ago
- ☆23Updated 3 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆13Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Updated 7 months ago
- Inference of TCR motifs☆32Updated last month
- ☆58Updated last year
- ☆17Updated 10 months ago
- ☆49Updated last year
- ☆39Updated 4 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆23Updated 3 months ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆23Updated 3 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- ☆10Updated 9 months ago
- Network construction Algorithm☆22Updated 11 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- ☆10Updated 2 months ago
- ☆47Updated 7 months ago
- ☆36Updated last year
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated 11 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆34Updated 3 years ago
- Single-cell Case Control Analysis☆51Updated 9 months ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆19Updated 2 weeks ago