olapuentesantana / easier_manuscriptLinks
☆15Updated 4 years ago
Alternatives and similar repositories for easier_manuscript
Users that are interested in easier_manuscript are comparing it to the libraries listed below
Sorting:
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated 6 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated last month
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Updated 10 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆12Updated last year
- ☆25Updated 3 years ago
- ☆59Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆24Updated 3 years ago
- ☆47Updated 9 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated 4 months ago
- ☆51Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- ☆13Updated last year
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated last month
- ☆39Updated 4 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆39Updated 2 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆24Updated 6 months ago
- Pseudotime Analysis for Bulk Data☆18Updated last year
- Computational identification of targets for CAR-T cell therapy in AML☆20Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Tools for assessing clustering robustness☆25Updated last month
- ☆37Updated 3 years ago
- ☆10Updated 5 months ago
- ☆37Updated 3 weeks ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago