olapuentesantana / easier_manuscript
☆15Updated 3 years ago
Alternatives and similar repositories for easier_manuscript:
Users that are interested in easier_manuscript are comparing it to the libraries listed below
- cell type deconvolution for multi-condition bulk RNA-seq data☆22Updated 2 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆13Updated 3 weeks ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- ☆45Updated 5 months ago
- ☆18Updated 3 months ago
- ☆17Updated 3 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆19Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆28Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Ordering gene-expression and functional events in single-cell experiments☆20Updated 10 months ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆13Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆29Updated last month
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆39Updated 10 months ago
- Computational identification of targets for CAR-T cell therapy in AML☆16Updated 2 years ago
- ☆22Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 2 months ago
- ☆20Updated last year
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated last year
- Network construction Algorithm☆20Updated 4 months ago
- ☆31Updated 8 months ago
- Single-Cell Inference of Class Switch Recombination☆18Updated 5 months ago
- scWGCNA☆56Updated 2 years ago
- ☆16Updated 2 years ago
- A record of the analysis pipelines used to create the HTAPP data☆31Updated last month
- ☆54Updated last year