dtsoucas / GiniClust2Links
☆12Updated 6 years ago
Alternatives and similar repositories for GiniClust2
Users that are interested in GiniClust2 are comparing it to the libraries listed below
Sorting:
- repo to explore spatial data in R/Bioconductor and Python☆12Updated 5 years ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆21Updated 3 years ago
- Scripts for data and figure generation in SAVER paper☆17Updated 4 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆27Updated 5 months ago
- CiteFuse:☆28Updated 2 years ago
- ☆28Updated 3 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆16Updated 6 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- ☆20Updated last year
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆17Updated 4 years ago
- ☆16Updated 3 years ago
- Hierarchical classification of cells☆23Updated 10 months ago
- benchmark for single-cell RNA-seq imputation methods☆26Updated last year
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated last year
- ☆15Updated last year
- Marker Selection by matching manifolds and elastic net☆23Updated 8 months ago
- ☆10Updated 2 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated last week
- Clone of the Bioconductor repository for the batchelor package.☆16Updated 3 months ago
- ☆23Updated last month
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index☆35Updated 7 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Inference of switch-like differential expression along single-cell trajectories☆20Updated 7 years ago
- RNA velocity validation☆22Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- scID☆13Updated 3 years ago