BIMSBbioinfo / ikarusLinks
Identifying tumor cells at the single-cell level using machine learning
☆48Updated 9 months ago
Alternatives and similar repositories for ikarus
Users that are interested in ikarus are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 2 years ago
- Tools used in Human Cell Landscape(HCL)☆56Updated 5 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆39Updated 7 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆63Updated last month
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆86Updated 2 months ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- R package for Pathway RespOnsive GENe activity inference☆107Updated 2 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- This is the official repository for the Human Cell Atlas Heart project.☆29Updated 5 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆38Updated last year
- Analysis of cell-cell communication at single-cell resolution☆104Updated 11 months ago
- Single-Cell Clustering Assessment Framework☆105Updated last year
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆61Updated 7 months ago
- ☆32Updated 7 months ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 4 months ago
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- Single cell epigenomic clustering based on accessibility pattern☆23Updated 2 years ago
- Repository for Cibersortx☆61Updated 4 years ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated this week
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆108Updated 4 months ago
- ☆47Updated 3 years ago
- Functional Inference of Gene Regulation☆46Updated last year
- ☆33Updated 6 years ago
- ☆49Updated last year
- Draw phylogenetic trees of tumor evolution☆82Updated 2 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago