BIMSBbioinfo / ikarusLinks
Identifying tumor cells at the single-cell level using machine learning
☆48Updated 8 months ago
Alternatives and similar repositories for ikarus
Users that are interested in ikarus are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 2 years ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆59Updated 7 months ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆38Updated last year
- A method to rapidly assess cell type identity using both functional and random gene sets☆39Updated 6 months ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- Create cisTarget databases☆52Updated last month
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- This is the official repository for the Human Cell Atlas Heart project.☆29Updated 5 years ago
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- Tools used in Human Cell Landscape(HCL)☆56Updated 5 years ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated 2 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- ☆68Updated last year
- Unified access to several second-generation deconvolution methods☆73Updated 3 weeks ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆63Updated 3 weeks ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- R package for the analysis of single-cell immune repertoires☆43Updated 5 months ago
- Analysis of cell-cell communication at single-cell resolution☆103Updated 10 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆85Updated 2 months ago
- Gene group activity utility functions for Scanpy☆83Updated 7 months ago
- Functional Inference of Gene Regulation☆46Updated last year
- Single-cell Lung Cancer Atlas with 1.2M cells☆65Updated 6 months ago
- Bostongene cell deconvolution algorithm from RNAseq☆56Updated last year
- ☆47Updated 6 months ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 3 months ago
- Repository for Cibersortx☆61Updated 4 years ago
- ☆32Updated 6 months ago
- CHOIR : Clustering Hierarchy Optimization by Iterative Random forests (www.CHOIRclustering.com)☆79Updated 3 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆43Updated 3 weeks ago
- ☆26Updated 9 months ago