BIMSBbioinfo / ikarusLinks
Identifying tumor cells at the single-cell level using machine learning
☆49Updated last year
Alternatives and similar repositories for ikarus
Users that are interested in ikarus are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 3 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆97Updated 8 months ago
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated 2 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated last year
- Repository for Cibersortx☆62Updated 4 years ago
- Mapping the Functional Landscape of TCR Repertoire☆35Updated 4 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆39Updated 2 years ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆67Updated 6 months ago
- ☆33Updated last year
- Functional Inference of Gene Regulation☆51Updated last year
- ☆34Updated 6 years ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆44Updated last month
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated this week
- A method to rapidly assess cell type identity using both functional and random gene sets☆39Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- ☆53Updated last year
- Create cisTarget databases☆55Updated 7 months ago
- ☆48Updated last year
- CHOIR : Clustering Hierarchy Optimization by Iterative Random forests (www.CHOIRclustering.com)☆87Updated 9 months ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- ☆53Updated 2 years ago
- Tools used in Human Cell Landscape(HCL)☆56Updated 5 years ago
- R package for Pathway RespOnsive GENe activity inference☆114Updated 3 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆82Updated 9 months ago
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆41Updated 2 years ago
- Draw phylogenetic trees of tumor evolution☆87Updated 2 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- ☆33Updated 3 years ago
- single-cell clustering based on alternative splicing landscapes☆23Updated last year