JiaLiVUMC / scMRMA
☆16Updated last year
Alternatives and similar repositories for scMRMA
Users that are interested in scMRMA are comparing it to the libraries listed below
Sorting:
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆45Updated 4 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 5 months ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆20Updated last month
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆36Updated 4 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆42Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆64Updated 7 months ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- Functions for single cell data analysis☆31Updated 3 years ago
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Updated 5 years ago
- scWGCNA☆60Updated 2 years ago
- ☆64Updated 10 months ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆22Updated 3 weeks ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆77Updated 8 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated 10 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 3 weeks ago
- scGSVA: Perform GSVA for single cell RNA seq☆57Updated 6 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆26Updated 2 years ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Updated 3 years ago
- ☆37Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- ☆40Updated 4 years ago
- Accurate and fast cell marker gene identification with COSG☆44Updated last month
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- ☆31Updated 3 months ago
- A pipeline for scRNA-seq data analysis☆14Updated last month
- Gene regulatory network containing signed transcription factor-target gene interactions☆78Updated last year
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆40Updated 2 years ago
- Code repository for single cell RNA-seq☆34Updated 4 years ago