JiaLiVUMC / scMRMA
☆15Updated last year
Alternatives and similar repositories for scMRMA:
Users that are interested in scMRMA are comparing it to the libraries listed below
- A pipeline for scRNA-seq data analysis☆12Updated last year
- ☆52Updated 6 months ago
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆19Updated last year
- scWGCNA☆56Updated 2 years ago
- ☆59Updated 5 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆47Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆28Updated 2 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- Functions for single cell data analysis☆29Updated 3 years ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆42Updated 2 weeks ago
- scRNA-seq cell type identification☆44Updated 5 years ago
- R package for pathway analysis in scRNA-seq data☆66Updated 5 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated 11 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated last year
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆21Updated last year
- Method for de novo mutation calling from droplet based single cell RNA seq data☆12Updated 3 years ago
- ☆77Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆39Updated last week
- Accurate and fast cell marker gene identification with COSG☆40Updated last year
- ☆39Updated 3 years ago
- A tool for removing doublets from single-cell RNA-seq data☆70Updated 4 years ago
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆44Updated 10 months ago
- Mollecular Functional Portraits☆36Updated 9 months ago
- ☆53Updated 4 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆31Updated 4 years ago
- ☆37Updated 3 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆68Updated 8 months ago
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Updated 5 years ago