OscarGVelasco / ClusterFoldSimilarityLinks
Calculate cluster similarity between clusters from different single cell datasets/batches/samples.
☆24Updated 7 months ago
Alternatives and similar repositories for ClusterFoldSimilarity
Users that are interested in ClusterFoldSimilarity are comparing it to the libraries listed below
Sorting:
- ☆32Updated 10 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆29Updated 3 years ago
- Functional Inference of Gene Regulation☆49Updated last year
- scWGCNA☆61Updated 3 years ago
- ☆39Updated 3 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- ☆52Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆77Updated 3 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated 3 weeks ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- ☆24Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- ☆39Updated 4 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- comprehensive analysis of single-cell transcriptomics data☆25Updated 8 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- R package to detect breakpoints and assign somies to scATAC-seq data☆42Updated last week
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- R package IReNA☆28Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆19Updated 3 years ago
- R package of CSOmap(developing☆13Updated 3 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆25Updated last year
- ☆25Updated last month
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- Ordering gene-expression and functional events in single-cell experiments☆25Updated last year
- ☆37Updated 3 years ago