OscarGVelasco / ClusterFoldSimilarityLinks
Calculate cluster similarity between clusters from different single cell datasets/batches/samples.
☆23Updated 4 months ago
Alternatives and similar repositories for ClusterFoldSimilarity
Users that are interested in ClusterFoldSimilarity are comparing it to the libraries listed below
Sorting:
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- ☆37Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆32Updated 9 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 10 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 2 weeks ago
- ☆32Updated 7 months ago
- R package gathering a set of wrappers to apply various integration methods to Seurat objects (and rate such methods)☆32Updated 3 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 3 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 8 months ago
- ☆58Updated last year
- R package of CSOmap(developing☆14Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆31Updated 2 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it …☆21Updated 2 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆23Updated 3 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Hierarchical Cell Annotation☆24Updated 9 months ago
- Network construction Algorithm☆22Updated 11 months ago
- R package IReNA☆28Updated 9 months ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- R tools for analysis and visualization of single-cell subclustering data☆17Updated last year
- ☆49Updated last year
- ☆50Updated 5 years ago
- ☆10Updated 2 years ago
- Code used to process the data of the HBCA project☆30Updated last year