Alternatives and similar repositories for ClusterFoldSimilarity

Users that are interested in ClusterFoldSimilarity are comparing it to the libraries listed below

• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆38Updated 4 years ago
• UPSUTER / GEMLI
  ☆32Updated 8 months ago
• CFeregrino / scWGCNA
  scWGCNA
  ☆61Updated 2 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆33Updated 10 months ago
• colomemaria / epiAneufinder
  R package to detect breakpoints and assign somies to scATAC-seq data
  ☆40Updated last week
• veltenlab / CloneTracer
  This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…
  ☆26Updated 11 months ago
• wenweixiong / MARVEL
  ☆51Updated last year
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆76Updated 2 months ago
• buenrostrolab / FigR
  Functional Inference of Gene Regulation
  ☆46Updated last year
• HectorRDB / condiments
  Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression
  ☆29Updated 10 months ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆28Updated 3 years ago
• omicsCore / scTyper
  scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
  ☆31Updated 2 years ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆37Updated 6 years ago
• neurorestore / DE-analysis
  ☆39Updated 4 years ago
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆30Updated last year
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated 11 months ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• One-Biosciences / MAYA
  ☆23Updated last year
• jiang-junyao / IReNA
  R package IReNA
  ☆28Updated 10 months ago
• gxiaolab / scAllele
  ☆38Updated last month
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆23Updated last year
• KChen-lab / METAFlux
  ☆73Updated last year
• lijxug / CSOmapR
  R package of CSOmap(developing
  ☆13Updated 3 years ago
• scCOVID-19 / COVIDPBMC
  Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection
  ☆41Updated 3 years ago
• NMikolajewicz / scMiko
  R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…
  ☆31Updated 2 years ago
• gabrielakinker / CCLE_heterogeneity
  ☆58Updated last year
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated 5 months ago
• KlugerLab / DAseq
  ☆41Updated 4 years ago
• GfellerLab / SuperCell
  Coarse-graining of large single-cell RNA-seq data into metacells
  ☆89Updated 3 months ago