zhaoyanswill / RAPSearch2Links
Reduced Alphabet based Protein similarity Search
☆41Updated 4 years ago
Alternatives and similar repositories for RAPSearch2
Users that are interested in RAPSearch2 are comparing it to the libraries listed below
Sorting:
- Protein Alignment and Detection Interface☆61Updated last year
- de novo virus assembler of Illumina paired reads☆56Updated 4 years ago
- Maximum likelihood demultiplexing☆47Updated 4 months ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Updated 6 years ago
- A method of assessing sequence complexity based on kmer frequencies☆32Updated 7 years ago
- ☆23Updated 6 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 7 months ago
- visualising sequence similarity with Circos☆40Updated 5 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 3 years ago
- mBin: a methylation-based binning framework for metagenomic SMRT sequencing reads☆25Updated 2 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples☆45Updated last year
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.☆48Updated 3 years ago
- SINA - Reference based multiple sequence alignment☆42Updated 4 years ago
- Using kallisto for metagenomic analysis☆50Updated 8 years ago
- MetaCompass: Reference-guided Assembly of Metagenomes☆39Updated last week
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- Repository of our application for human-augmented binning☆28Updated 4 years ago
- ☆41Updated 4 years ago
- CRyPTIC data processing pipelines☆34Updated 11 months ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated last week
- ☆41Updated last month
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆52Updated 2 years ago
- De novo Extraction of Strains from MetAgeNomes☆69Updated 5 years ago
- SHallow shOtGUN profiler☆54Updated 3 years ago
- OPAL: Open-community Profiling Assessment tooL☆28Updated 5 months ago
- Calculates the lowest common ancestors of each query sequence in a Blast result☆31Updated 7 years ago
- ☆45Updated last year