biocore / q2-greengenes2Links
A QIIME 2 plugin for interaction with the Greengenes2 database
☆33Updated last year
Alternatives and similar repositories for q2-greengenes2
Users that are interested in q2-greengenes2 are comparing it to the libraries listed below
Sorting:
- gutSMASH☆55Updated this week
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆64Updated last week
- Protein Alignment and Detection Interface☆60Updated last year
- A general metagenomics data mining system focus on robust microbiome research☆58Updated last year
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆36Updated 6 years ago
- CLI tool to annotate genes with KOfam☆86Updated 2 years ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆34Updated last year
- Pipeline for major biological analyses.☆35Updated 3 years ago
- ☆40Updated 4 years ago
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Updated 8 months ago
- Metagenomics-related extended functionalities to samtools☆21Updated 2 years ago
- scripts for estimating bacteria replication rates based on population genome copy number variation☆72Updated 5 years ago
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆64Updated last year
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆23Updated 4 years ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- ☆32Updated 9 months ago
- Exploring the "dusk matter" of the RNA virosphere☆35Updated 3 years ago
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year