Virus Protein Structural Analysis Toolkit
☆15Sep 9, 2024Updated last year
Alternatives and similar repositories for vpSAT
Users that are interested in vpSAT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CLANS_2 is a Python-based program for clustering sequences in the 2D or 3D space, based on their sequence similarities. CLANS visualizes …☆26Dec 5, 2024Updated last year
- VIRIDIC (Virus Intergenomic Distance Calculator) computes pairwise intergenomic distances/similarities amongst viral genomes.☆20Oct 19, 2023Updated 2 years ago
- ☆31Oct 26, 2021Updated 4 years ago
- Integrative virome pipeline☆14Nov 4, 2024Updated last year
- ☆19Dec 23, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Bayesian Optimization for protein design and mining☆28Jul 2, 2026Updated 2 months ago
- Latents-based conformational control in OpenFold3.☆79May 25, 2026Updated 3 months ago
- ☆56Mar 29, 2026Updated 5 months ago
- ☆19Aug 12, 2026Updated 3 weeks ago
- Homomer symmetry prediction from protein sequence☆46Mar 13, 2025Updated last year
- Helper scripts for making phylogenies☆15Jul 9, 2026Updated last month
- ☆15Jun 19, 2026Updated 2 months ago
- Bioinformatic Application for Quantification and LAbeling of VirAl taxonomy☆18Jul 13, 2026Updated last month
- Scripts and utilities for pangenomic/phylogenomic analysis of prokaryotic genomes. Scripts for the analysis of genomic features such as C…☆12May 28, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- DyNoPy☆11Sep 5, 2024Updated last year
- A simple program to classify the lifestyle of phages.☆18May 22, 2023Updated 3 years ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆16Jun 26, 2026Updated 2 months ago
- MacSyFinder models allowing for a systematic search of anti-phage systems☆25May 14, 2026Updated 3 months ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 6 months ago
- ☆17Jun 3, 2025Updated last year
- ☆19Aug 31, 2025Updated last year
- ☆32Sep 21, 2023Updated 2 years ago
- ☆29May 26, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Official GitHub repository for the manuscript entitled "Computational Design of Metallohydrolases" by Kim, Woodbury, & Ahern et al. publi…☆28Mar 2, 2026Updated 6 months ago
- Decoding the functional networks of non-model organisms☆12Aug 12, 2026Updated 3 weeks ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 8 months ago
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆34Nov 2, 2025Updated 10 months ago
- ☆22Apr 20, 2026Updated 4 months ago
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆38May 25, 2026Updated 3 months ago
- ☆16Sep 29, 2025Updated 11 months ago
- Assign taxonomic ranks based on evolutionary divergence.☆24Mar 3, 2026Updated 6 months ago
- ☆19Jul 21, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆15Aug 26, 2024Updated 2 years ago
- Official repository for the paper "Evaluating variant effect prediction across viruses"☆22Mar 30, 2026Updated 5 months ago
- FUGAsseM: Function predictor of Uncharacterized Gene products by Assessing high-dimensional community data in Microbiomes☆21Dec 26, 2025Updated 8 months ago
- Viral protein family functional prediction using protein language models☆23Jan 6, 2026Updated 7 months ago
- ☆52May 29, 2026Updated 3 months ago
- An awesome YAML-based CV that works with your existing Jekyll site☆11Jan 10, 2019Updated 7 years ago
- A tool to assemble high-quality phages from metagenomes.☆26May 22, 2026Updated 3 months ago