Tutorial files
☆12Aug 7, 2024Updated 2 years ago
Alternatives and similar repositories for roscon2024
Users that are interested in roscon2024 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Oct 8, 2024Updated 2 years ago
- ☆47Sep 16, 2024Updated 2 years ago
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆26Jul 3, 2016Updated 10 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆13Feb 16, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Structure-conditioned masked language modeling for protein sequence design☆75Jan 31, 2024Updated 2 years ago
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆23Oct 26, 2026Updated last week
- random colab notebooks for biology☆25Aug 23, 2025Updated last year
- Kuhlman Lab Installation of AlphaFold3☆42Oct 19, 2026Updated 2 weeks ago
- ☆14Aug 29, 2024Updated 2 years ago
- Making Protein Language Modeling Accessible to All Biologists☆171Updated this week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆28Aug 9, 2023Updated 3 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆17May 16, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆121Dec 7, 2022Updated 3 years ago
- ☆16Jun 11, 2021Updated 5 years ago
- Colorblind-friendly, perceptually uniform palettes for pymol☆22Jan 25, 2021Updated 5 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 5 years ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 3 years ago
- ☆37Dec 6, 2025Updated 10 months ago
- ☆38Dec 21, 2023Updated 2 years ago
- ☆14Jun 4, 2024Updated 2 years ago
- Neurally-derived Potts models for protein design, inspired by dTERMen☆16Aug 23, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A bunch of shell utilities for dealing the silent files☆82Apr 6, 2026Updated 6 months ago
- GraphVAMPnets combines graph neural networks with variational approach for Markovian process (VAMP) theory to identify the slow collectiv…☆13Feb 20, 2024Updated 2 years ago
- ☆10Jun 28, 2025Updated last year
- A tool to extract and annotate genes from raw RNA-seq reads.☆10Dec 20, 2024Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆37May 28, 2024Updated 2 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- slurm monitoring tools and interface☆11Apr 24, 2023Updated 3 years ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆28Aug 12, 2021Updated 5 years ago
- SPOT-1D-LM: Reaching Alignment-profile-based Accuracy in Predicting Protein Secondary and Tertiary Structural Properties without Alignmen…☆11Feb 1, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24May 19, 2024Updated 2 years ago
- ☆10Nov 22, 2022Updated 3 years ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆39Jul 28, 2022Updated 4 years ago
- ☆25Sep 22, 2026Updated last month
- Visualize structure data from Biotite with PyMOL☆26Mar 16, 2025Updated last year
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 7 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year