Wublab / pythia_ppiLinks
PPI version of Pythia
☆15Updated 9 months ago
Alternatives and similar repositories for pythia_ppi
Users that are interested in pythia_ppi are comparing it to the libraries listed below
Sorting:
- ML-optimized library design with improved fitness and diversity for protein engineering☆35Updated last year
- ☆28Updated 6 months ago
- ☆33Updated 4 months ago
- Extension of ThermoMPNN for double mutant predictions☆42Updated 3 weeks ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆34Updated last week
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated last month
- ☆27Updated last year
- Modelling protein conformational landscape with Alphafold☆51Updated last month
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆19Updated 5 months ago
- code for IDR binding paper 2025☆47Updated 6 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆62Updated last month
- ☆20Updated 3 weeks ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆44Updated 9 months ago
- Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model☆24Updated 9 months ago
- Explicit crosslinks in AlphaFold 3☆22Updated 5 months ago
- bakerlab pymol scripts☆24Updated 5 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- An accurate and efficient protein sequence design approach☆24Updated 5 months ago
- ☆42Updated 2 months ago
- ☆23Updated last year
- code for SeqDance/ESMDance, biophysics-informed protein language models☆40Updated 4 months ago
- ☆50Updated last month
- Scores for Hydrophobicity and Charges based on SASAs☆36Updated 2 months ago
- ☆37Updated 2 weeks ago
- ☆19Updated 9 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆23Updated 5 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 3 months ago