xiekunwhy / bsaLinks
Bulked-Segregant Analysis using vcf file with or without parents
☆28Updated 6 months ago
Alternatives and similar repositories for bsa
Users that are interested in bsa are comparing it to the libraries listed below
Sorting:
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆42Updated 2 months ago
- ☆43Updated last year
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 6 years ago
- Scripts and procedures for detecting positively selected genes and codons in primates☆21Updated 4 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆41Updated 10 months ago
- ☆34Updated 10 months ago
- Scripts that used in our chicken T2T manuscript.☆20Updated 2 years ago
- A tool for performing collinearity-incorporating homology inference☆32Updated last year
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated last month
- ☆22Updated 6 years ago
- ☆16Updated 9 months ago
- Genome haplotype assembly and assessment method☆12Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆44Updated 2 months ago
- Pipelines and scripts for analysing RNA-seq,genome and other sequecing data.☆9Updated 5 years ago
- scripts☆17Updated 6 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Chromosome-scale and haplotype-resolved assmebly of tetraploid cultiavetd potato with polyploidy graph binning☆29Updated 11 months ago
- ☆40Updated 2 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- ☆21Updated 2 years ago
- ☆24Updated 2 years ago
- A machine learning-based genotyping tool for structural variation in short reads☆21Updated 3 months ago
- Codes for the lettuce resequencing project in 2020☆30Updated 4 years ago
- ☆25Updated 2 years ago
- ☆14Updated 5 years ago