xiekunwhy / bsaLinks
Bulked-Segregant Analysis using vcf file with or without parents
☆29Updated 8 months ago
Alternatives and similar repositories for bsa
Users that are interested in bsa are comparing it to the libraries listed below
Sorting:
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- ☆42Updated last year
- scripts☆18Updated 6 years ago
- scripts for the project of seven thaliana genomes assembly☆41Updated 4 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆47Updated 3 weeks ago
- Scripts that used in our chicken T2T manuscript.☆21Updated 2 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆43Updated last year
- ☆22Updated 6 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated 3 weeks ago
- ☆37Updated last month
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆26Updated last year
- ☆27Updated 2 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- Plant genome assembly and annotation pipeline using snakemake☆47Updated 4 months ago
- ☆21Updated 2 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- ☆17Updated 3 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 6 years ago
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Scripts and procedures for detecting positively selected genes and codons in primates☆21Updated 4 years ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- scripts for a Genetics Map software☆11Updated 7 years ago
- ☆24Updated 2 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆47Updated 3 months ago