☆11Feb 4, 2026Updated last month
Alternatives and similar repositories for finestructure4
Users that are interested in finestructure4 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- faster haplotype-based admixture inference and dating software☆10Nov 25, 2025Updated 3 months ago
- A tool for visualization of pairwise alignments of multiple sequences☆17Aug 12, 2025Updated 7 months ago
- An statistical approach leveraging segments of distinct ancestries within individuals to estimate similarity in underlying causal effect …☆13Sep 27, 2024Updated last year
- HybridCheck, an R package for quickly scripting scans of sequence data for recombination regions.☆15Jan 28, 2022Updated 4 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆16Oct 12, 2024Updated last year
- ☆26Mar 23, 2024Updated 2 years ago
- SparsePainter: fast, accurate and fine-scale chromosome painting software based on PBWT and HashMap☆18Feb 11, 2026Updated last month
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated 2 years ago
- Annotation Pipeline for NLR genes☆16Dec 6, 2018Updated 7 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆30Sep 27, 2019Updated 6 years ago
- ☆15Dec 3, 2024Updated last year
- R package for creating plots☆11Jan 17, 2026Updated 2 months ago
- A toolkit for identifying recombination and recombinant genotypes☆25Dec 3, 2025Updated 3 months ago
- Phase 2 repo for the Inserm Workshop on Machine Learning in Biology☆18Dec 17, 2025Updated 3 months ago
- Automatised pipeline of ConsensuSV workflow.☆24Aug 23, 2023Updated 2 years ago
- RabbitMash: an efficient highly optimized implementation of Mash.☆20Oct 28, 2023Updated 2 years ago
- Synteny matrix representation with maximum likelihood pipeline☆16Jul 7, 2021Updated 4 years ago
- Cyclic DNA Sequence Aligner☆11Apr 15, 2020Updated 5 years ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆19Nov 29, 2023Updated 2 years ago
- Software for estimating genome-wide genealogies for thousands of samples☆41Oct 17, 2025Updated 5 months ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆17Oct 6, 2025Updated 5 months ago
- Code for doing MIC predictions on genomes☆42Dec 5, 2019Updated 6 years ago
- Notes and code for running UK Biobank GWAS at the MRC IEU☆18Jul 18, 2024Updated last year
- A tool set to assess the quality of the per read phasing and reduce the errors.☆13Jun 25, 2020Updated 5 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 6 years ago
- MUM&Co uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆76Jan 12, 2026Updated 2 months ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆17Jan 16, 2026Updated 2 months ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆28May 24, 2021Updated 4 years ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Feb 7, 2025Updated last year
- A tool for evaluating long-read de novo assembly results☆52Aug 25, 2024Updated last year
- Spark VCF data source implementation for Dataframes☆15Jul 15, 2022Updated 3 years ago
- A tutorial for learning de novo assembly☆33Dec 8, 2011Updated 14 years ago
- Implementation of Positional Burrows-Wheeler Transform for genetic data☆113Nov 20, 2025Updated 4 months ago
- ☆12Jun 12, 2023Updated 2 years ago
- blastn2dotplots: multiple dot-plot visualizer☆24Sep 15, 2025Updated 6 months ago
- ☆23Dec 8, 2025Updated 3 months ago
- Support scripts for the visualisation of pangenome analyses in Graphia☆21Oct 7, 2024Updated last year