JaeYoonKim72 / GMStoolLinks
☆17Updated 5 years ago
Alternatives and similar repositories for GMStool
Users that are interested in GMStool are comparing it to the libraries listed below
Sorting:
- A set of workflows written in Nextflow for Genome Annotation.☆46Updated last year
- ☆11Updated 3 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- ☆10Updated 5 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 3 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 8 months ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Updated 4 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- Evolutionary Transcriptomics with R☆49Updated 3 weeks ago
- ☆44Updated 8 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Perform GWAS using the FarmCPU model.☆24Updated 11 months ago
- Two methods for mapping and visualizing associated data on phylogeny using ggtree☆12Updated 6 years ago
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆30Updated 2 months ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- Genome Annotation Without Nightmares☆46Updated 10 months ago
- detection of duplications and deletions using Python based machine learning techniques☆28Updated 6 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆23Updated 2 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 4 years ago
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆38Updated last year
- Haplotype and population structure inference using neural networks.☆27Updated last year
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆25Updated 4 years ago
- ☆31Updated 2 months ago
- A toolkit for performing set operations - union, intersection and complement - on k-mer lists.☆34Updated 3 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Merge transcriptome assemblies☆31Updated 9 years ago
- MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes☆30Updated 4 years ago