Distributed and cloud computing framework for vg
☆23Apr 21, 2026Updated 2 weeks ago
Alternatives and similar repositories for toil-vg
Users that are interested in toil-vg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis☆22Dec 18, 2025Updated 4 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- GBWT-based handle graph☆33Apr 13, 2026Updated 3 weeks ago
- SV calling for diploid assemblies☆31Mar 22, 2024Updated 2 years ago
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- succinct labeled graphs with collections and paths☆15Nov 18, 2018Updated 7 years ago
- displays multiple genomic sequences in the form of a tube map☆224Nov 12, 2025Updated 5 months ago
- A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)☆13Mar 12, 2018Updated 8 years ago
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated 10 months ago
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jan 19, 2023Updated 3 years ago
- Library for the Handle Graph abstraction☆24Jan 15, 2026Updated 3 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆39Feb 22, 2023Updated 3 years ago
- ☆11Mar 12, 2026Updated last month
- ☆20Mar 13, 2026Updated last month
- ☆15Apr 2, 2024Updated 2 years ago
- ULTRA Locates Tandemly Repetitive Areas☆40Oct 23, 2025Updated 6 months ago
- Visualise interstrain recombination from environmental samples.☆27Apr 18, 2019Updated 7 years ago
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- A server implementation of the htsget protocol for bioinformatics in Rust☆49Updated this week
- Genevieve genome report tool☆14Dec 8, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PanTools☆30May 7, 2019Updated 6 years ago
- For bluntifying overlapped GFAs☆13Jul 26, 2024Updated last year
- Copy Number Methods for Detection and Genome Wide Association Tests☆22Nov 4, 2024Updated last year
- To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be co…☆31Dec 26, 2023Updated 2 years ago
- Handy tools for Microbiome analysis in R☆18May 22, 2019Updated 6 years ago
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆60Apr 24, 2024Updated 2 years ago
- A JBrowse 1 plugin to view multiple alignment format (MAF) files☆27Oct 25, 2023Updated 2 years ago
- ☆15Oct 3, 2017Updated 8 years ago
- NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data☆19Jan 13, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27May 24, 2021Updated 4 years ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- A simple script to create a customizable html file from an AnnotSV output.☆21Apr 20, 2026Updated 2 weeks ago
- A fast, parallel, streaming multipart uploader for S3☆14Mar 23, 2017Updated 9 years ago
- Graphical interactive tool for the visualization of sequence graphs in GFA format.☆74Feb 19, 2019Updated 7 years ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 5 years ago
- ☆102Apr 22, 2024Updated 2 years ago