Visualizing genetic sequence variation
☆14Apr 27, 2020Updated 6 years ago
Alternatives and similar repositories for VarSifter
Users that are interested in VarSifter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Web-based database system for flow cell management (incl. REST API)☆16Mar 7, 2024Updated 2 years ago
- Pipeline in place at the UGI for DNA level analysis☆11Aug 29, 2016Updated 9 years ago
- A python program that uses ReadBack phased haplotypes in population of samples and returns extended haplotype blocks.☆15Oct 30, 2024Updated last year
- Research pipeline for exploring clinically relevant genomic variants☆17Jun 2, 2026Updated last week
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Distributed and cloud computing framework for vg☆23Apr 21, 2026Updated last month
- a pileup library that embraces the huge☆43Oct 2, 2020Updated 5 years ago
- ☆10Nov 3, 2020Updated 5 years ago
- Allele frequency filter app☆14May 4, 2022Updated 4 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Mar 30, 2021Updated 5 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 27, 2026Updated 2 months ago
- Aligner for sequencing data☆21Apr 20, 2026Updated last month
- A JBrowse plugin for plotting multiple bigwig subtracks☆12Feb 13, 2022Updated 4 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆32Jul 6, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Mar 21, 2021Updated 5 years ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- ☆11May 11, 2023Updated 3 years ago
- Nextflow implementation of the GATK HaplotypeCaller pipeline☆13Dec 27, 2025Updated 5 months ago
- Variant Caller Analysis Dashboard and Data Management System☆36Feb 8, 2016Updated 10 years ago
- Automated human exome/genome variants detection from FASTQ files☆23Sep 27, 2021Updated 4 years ago
- BrowseVCF is a web-based application and workflow to quickly prioritise disease-causative variants in VCF files.☆47Jun 26, 2020Updated 5 years ago
- do some exercise☆14Dec 2, 2025Updated 6 months ago
- Benchmarking toolkit for variant calling☆48Oct 13, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- DNN-DTIs: improved drug-target interactions prediction using XGBoost feature selection and deep neural network☆12Mar 5, 2021Updated 5 years ago
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- A Girder plugin for exposing slicer execution model's CLI modules over the web☆18Feb 26, 2026Updated 3 months ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 8 months ago
- ☆46Nov 18, 2019Updated 6 years ago
- A CNN model to identify MEIs in WGS☆13Mar 4, 2025Updated last year
- Provides syntax highlighting for Apptainer/Singularity definition files.☆10Dec 24, 2025Updated 5 months ago
- SQL-like query language for the SAM/BAM file format☆30Sep 20, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50May 8, 2026Updated last month
- Deduplication for cfDNA sequencing data☆11Jul 5, 2017Updated 8 years ago
- Enabling differential allele-specific analysis☆11Dec 28, 2024Updated last year
- AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis☆22May 12, 2026Updated 3 weeks ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 9 months ago
- A Firefox add-on that warns about changing certificates☆12Dec 1, 2019Updated 6 years ago
- ☆15Apr 2, 2025Updated last year