☆20Mar 13, 2026Updated 3 months ago
Alternatives and similar repositories for kled
Users that are interested in kled are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Method to optimally select samples for validation and resequencing☆30Apr 6, 2021Updated 5 years ago
- Ultra-efficient mapping-free structural variation genotyper☆20Jul 28, 2021Updated 4 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆40May 19, 2026Updated last month
- Regenotyping structural variants through an accurate and efficient force-calling method☆26Apr 17, 2026Updated 2 months ago
- Pacbio sequence alignment tool, please use "git clone" to copy and use the repository☆18Feb 17, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆13Nov 15, 2017Updated 8 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆21Mar 27, 2026Updated 3 months ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆78Nov 4, 2025Updated 7 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆67May 26, 2026Updated last month
- VNTR annotation using motif selection☆42May 25, 2026Updated last month
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- A tool for motif annotation and visualization in tandem repeats.☆14May 26, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.☆11Jun 22, 2026Updated last week
- Compare the quality of multiple genomes, along with their annotations.☆22Jun 12, 2026Updated 2 weeks ago
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆42Feb 15, 2025Updated last year
- An insertion caller for Illumina paired-end WGS data.☆24Aug 22, 2025Updated 10 months ago
- Python Tape Manager☆19Sep 10, 2025Updated 9 months ago
- Learn Julia in one workday!☆13Jan 7, 2020Updated 6 years ago
- Kmer Analysis of Pileups for Genotyping☆40Mar 6, 2026Updated 3 months ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆43Dec 18, 2025Updated 6 months ago
- Annotate non-coding regulatory vars using our GREEN-DB, prediction scores, conservation and pop AF☆20Jun 13, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆16Apr 2, 2024Updated 2 years ago
- Hosted version of cellxgene☆20Jun 25, 2026Updated last week
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Nov 20, 2022Updated 3 years ago
- Haplotype-aware assembly of complex regions and small genomes☆15May 21, 2026Updated last month
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- ☆129Jun 25, 2026Updated last week
- Scrooge is a high-performance pairwise sequence aligner based on the GenASM algorithm. Scrooge includes three novel algorithmic improveme…☆38Jun 23, 2023Updated 3 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆19Mar 5, 2019Updated 7 years ago
- LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads☆105Jun 25, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17Jan 15, 2025Updated last year
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- ☆10Dec 28, 2023Updated 2 years ago
- RawQuant is a Python package for extracting scan meta data and quantification values from Thermo .raw files.☆11Jan 4, 2019Updated 7 years ago
- VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant…☆16Apr 15, 2026Updated 2 months ago
- Hardware Accelerated Read Until☆18Sep 30, 2025Updated 9 months ago
- Genotyping of copy number sensitive allele-specific haplotypes☆28Jun 18, 2026Updated 2 weeks ago