infernet-h2020 / DCAlign
☆11Updated last year
Alternatives and similar repositories for DCAlign
Users that are interested in DCAlign are comparing it to the libraries listed below
Sorting:
- Fast protein domain structure embedding+search tool☆20Updated last week
- ☆22Updated last year
- ☆20Updated last week
- Python framework for doing ancestral sequence reconstruction☆38Updated 10 months ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆29Updated last year
- Non-sequential structural alignment program for protein structure☆19Updated 6 months ago
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- ☆30Updated last year
- Scripts to generate and analyze afdb clusters☆11Updated last year
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆14Updated 4 months ago
- Evolutionary conservation estimation of residues or nucleotides☆42Updated 3 years ago
- DeepECtransformer☆24Updated last year
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 4 months ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Updated 2 years ago
- ☆38Updated 7 months ago
- Protein Structure Archiver☆12Updated 11 months ago
- A domain parser for Alphafold models☆36Updated last year
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆16Updated last year
- Protein Sequence Annotation with Language Models☆20Updated 6 months ago
- EPSAPG: An Extensive Protein Sequence Alignment Profiles Generator Pipeline Combining MMseqs2 and PSI-BLAST☆11Updated last year
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆16Updated 2 years ago
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆19Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆26Updated last year
- Code for LazyAF pipeline☆20Updated last year
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆12Updated 2 years ago
- Detection of remote homology by comparison of protein language model representations☆53Updated 5 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆22Updated this week
- Next generation sequence parameter library for proteins☆30Updated last week
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆22Updated 2 weeks ago
- Transmembrane proteins predicted through Language Model embeddings☆36Updated this week