Sheikhizadeh / pantoolsLinks
PanTools
☆30Updated 6 years ago
Alternatives and similar repositories for pantools
Users that are interested in pantools are comparing it to the libraries listed below
Sorting:
- Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequenc…☆36Updated 5 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆32Updated 3 years ago
- Locus and lineage tests for bacterial GWAS☆29Updated 8 years ago
- Taxon-aware analysis of clustered protein sequences☆31Updated last year
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆36Updated 2 weeks ago
- Automatically exported from code.google.com/p/densitree☆28Updated 4 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- STRIDE: Species Tree Root Inference from Gene Duplication Events☆11Updated 7 years ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 8 months ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- scripts to parse and analyse MCScanX collinearity output☆33Updated 5 years ago
- Sorting Intolerant From Tolerant For Genomes☆29Updated 8 years ago
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆27Updated 8 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 2 months ago
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆22Updated 3 weeks ago
- ☆26Updated 4 years ago
- Economic Genome Assembly from Low Coverage Illumina and Nanopore Data☆19Updated 3 years ago
- Reference genome quality scores☆21Updated 5 years ago
- Scaffolding with assembly likelihood optimization☆21Updated 5 years ago
- ☆21Updated 6 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 7 months ago
- a broadly applicable tool for automated gene identification and retrieval☆32Updated last year
- A comparative genome scaffolding tool☆16Updated 7 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- Differential k-mer analysis☆39Updated last year
- A dotplot generator for large chromosomes☆43Updated 2 years ago
- Linear-time de novo Long Read Assembler☆41Updated last month
- ☆20Updated 3 years ago