ma-compbio / SPEIDLinks
☆14Updated 8 years ago
Alternatives and similar repositories for SPEID
Users that are interested in SPEID are comparing it to the libraries listed below
Sorting:
- ☆22Updated 8 years ago
- Code for reproducing the Sei manuscript results☆17Updated 3 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Updated 5 years ago
- ☆12Updated 4 years ago
- ☆19Updated 2 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- ☆18Updated last year
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆11Updated 2 years ago
- ☆21Updated 2 years ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆21Updated 11 months ago
- Kdrew's scripts for handling protein complex map data☆14Updated 2 weeks ago
- multiway chromatin interaction, 3D genome, single-nucleus, hypergraph representation learning☆29Updated 2 years ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆13Updated 4 months ago
- ☆17Updated 8 months ago
- ☆10Updated 5 years ago
- Predicting gene expression levels from genomic sequences☆53Updated 5 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- HLA-II ligand predictor.☆43Updated 2 years ago
- Chromatin interaction aware gene regulatory modeling with graph attention networks☆26Updated 2 years ago
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Updated 3 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- code repo for Set2Gaussian☆15Updated 5 years ago
- This is a repo that includes some resources about machine learning and the application in biology. We are students/alumni of Peking Unive…☆15Updated 5 years ago
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆33Updated last year
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Updated 6 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 8 months ago
- ☆11Updated 3 years ago
- ☆33Updated 2 years ago
- ☆14Updated 5 years ago
- Toolset for training quantitative sequence to function models.☆23Updated last year