Alternatives and similar repositories for mebs

Users that are interested in mebs are comparing it to the libraries listed below

• michaelkyu / PlasX
  PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
  ☆37Updated 3 years ago
• Matteopaluh / KEMET
  KEGG Module Evaluation Tool
  ☆30Updated last year
• snayfach / MAGpurify
  Improvement of metagenome-assembled genomes
  ☆53Updated 5 years ago
• allind / EukDetect
  ☆52Updated 2 weeks ago
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆41Updated 3 months ago
• michaelkyu / MobMess
  ☆21Updated 3 years ago
• lauriebelch / SOCfinder
  ☆16Updated 2 months ago
• AlexanderLabWHOI / EukHeist
  ☆26Updated 2 years ago
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆59Updated this week
• Russel88 / MAGinator
  MAGinator - Accurate SNV calling and profiling of MAGs
  ☆22Updated last month
• AnantharamanLab / PropagAtE
  Prophage Activity Estimator
  ☆26Updated last year
• RasmussenLab / phamb
  Downstream processing of VAMB binning for Viral Elucidation
  ☆50Updated last year
• danielchang2002 / TaxiBGC_2022
  Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…
  ☆16Updated 2 years ago
• functional-dark-side / agnostos-wf
  ☆45Updated 2 years ago
• ohlab / GRiD
  Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …
  ☆32Updated 5 years ago
• MattiaPandolfoVR / MetaPhage
  ☆37Updated last year
• EBI-Metagenomics / genome_uploader
  Python script to upload bins and MAGs to ENA (European Nucleotide Archive)
  ☆24Updated this week
• SWittouck / SCARAP
  A toolkit for prokaryotic comparative genomics
  ☆49Updated 5 months ago
• mtisza1 / Cenote-Taker3
  Discover and annotate the virome
  ☆44Updated 2 weeks ago
• endixk / ezaai
  EzAAI - High Throughput Prokaryotic AAI Calculator
  ☆42Updated last week
• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated 3 months ago
• a-h-b / binny
  ☆29Updated 2 years ago
• weisberglab / beav
  BEAV: Bacterial Element Annotation reVamped
  ☆66Updated 8 months ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆35Updated 3 years ago
• metaGmetapop / metapop
  A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations
  ☆42Updated 2 years ago
• ziyewang / MetaBinner
  ☆56Updated last year
• brinkmanlab / islandpath
  IslandPath standalone software
  ☆33Updated last year
• LottePronk / whokaryote
  Classify metagenomic contigs as eukaryotic or prokaryotic
  ☆37Updated 2 years ago
• jlw-ecoevo / gRodon2
  ☆44Updated last month
• metagenopolis / CroCoDeEL
  CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data
  ☆24Updated 2 weeks ago