MetabioinfomicsLab / MICROPHERRETLinks
MICROPHERRET: MICRObial PHEnotypic tRait ClassifieR using machine lEarning Techniques
☆12Updated last month
Alternatives and similar repositories for MICROPHERRET
Users that are interested in MICROPHERRET are comparing it to the libraries listed below
Sorting:
- ☆50Updated last month
- ☆26Updated 2 years ago
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆33Updated 3 years ago
- ☆56Updated last week
- Pipeline for identification of eukaryotic contigs in metagenomic assemblies☆13Updated last year
- A metatranscriptomic pipeline optimized for the study of microeukaryotes.☆17Updated last month
- ☆14Updated 2 years ago
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆36Updated this week
- ☆17Updated 8 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆54Updated last year
- ☆22Updated 2 years ago
- This program is designed for annotation of antimicrobal resistance(AMR), transposon(Tn) and integron(In) in bacteria.☆21Updated 2 years ago
- Snakemake workflow to map and quantify microbial genomes in metagenomic reads☆13Updated 4 months ago
- ☆33Updated 2 years ago
- Extract metadata from biosamples in NCBI☆17Updated 4 years ago
- Hydrocarbon biodegradation gene annotation☆19Updated 3 years ago
- Ready-to-use pipeline to detect, count and identify the hgcAB genes, involved in mercury methylation, from metagenomes☆10Updated last year
- ☆24Updated 7 years ago
- Pipeline for Reproducible and Scalable Integration of Metagenomic and Metatranscriptomic Data☆17Updated 2 months ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆40Updated 4 years ago
- HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes☆66Updated 3 years ago
- ☆20Updated last year
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- Python script to upload bins and MAGs to ENA (European Nucleotide Archive)☆25Updated this week
- Population genomics from metagenomes☆12Updated last year
- MetaCompare☆19Updated last year
- ☆47Updated last year
- ☆53Updated 5 years ago
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆23Updated 2 years ago