timothyjamesbecker / FusorSVLinks
A Data Fusion Method for Multi Source (VCF4.0+) Structural Variation Analysis
☆22Updated 7 months ago
Alternatives and similar repositories for FusorSV
Users that are interested in FusorSV are comparing it to the libraries listed below
Sorting:
- ☆51Updated 6 years ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- Structural variant caller☆55Updated 3 years ago
- SV genotyping with long reads☆39Updated 2 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- This is an unsupported fork of the PacBio blasr aligner. It contains my (very beta) optimizations and new functionality. It may disappea…☆22Updated 6 years ago
- ☆36Updated last year
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Fast and scalable variant annotation tool☆30Updated 3 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- ☆81Updated 6 months ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Structural variant merging tool☆53Updated last year
- A new tool to infer sex from massively parallel sequencing data.☆17Updated 3 months ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last month
- Variant annotation and merging pipeline☆39Updated last month
- Long-read splice alignment with high accuracy☆63Updated 11 months ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆51Updated 4 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated this week
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- ☆35Updated 4 years ago
- ☆31Updated last year
- Structural Variant Prediction Viewer☆35Updated 8 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated 2 years ago
- ☆29Updated 4 years ago
- A simple script to create a customizable html file from an AnnotSV output.☆19Updated last year
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago