saezlab / flopLinks
FunctionaL Omics Processing platform
☆13Updated last year
Alternatives and similar repositories for flop
Users that are interested in flop are comparing it to the libraries listed below
Sorting:
- ☆16Updated last month
- interactive plots for differential expression analysis☆34Updated 2 months ago
- Efficient retrieval, download, and unification of genomic data from leading biodiversity databases☆18Updated this week
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated 10 months ago
- pathway based data integration and visualization☆41Updated 4 months ago
- Two pass alignment for long reads☆22Updated 4 years ago
- ☆25Updated 2 months ago
- A pipeline creation tool using Snakemake☆11Updated last week
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- 🤖 Open‑source deep-learning-based splice‑site predictor that decodes splicing patterns across species☆25Updated last month
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 4 months ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Updated 5 years ago
- ☆21Updated last year
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Rapid and accurate ancestry inference using SNVs.☆20Updated last week
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆23Updated 2 months ago
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆11Updated 5 months ago
- ☆28Updated 2 years ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 2 months ago
- IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split …☆16Updated 2 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated 2 months ago
- Integrative analysis of complex structural variants☆22Updated 4 years ago
- A Generative Pre-Trained Transformer Package for Pangenomes☆52Updated 3 months ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 11 months ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- ☆19Updated 2 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆12Updated 8 months ago