YaoLab-Bioinfo / intansvLinks
Integrative analysis of structural variations.
☆40Updated 2 years ago
Alternatives and similar repositories for intansv
Users that are interested in intansv are comparing it to the libraries listed below
Sorting:
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Evolutionary Transcriptomics with R☆47Updated this week
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated last week
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 10 months ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆18Updated 3 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- Mapped QC analysis program☆43Updated 7 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- ☆51Updated 6 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 8 months ago
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Updated 10 months ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated last week
- Flexible Bayesian inference of mutational signatures☆41Updated 3 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆31Updated 10 months ago
- Adapters for trimming☆30Updated 7 years ago
- A tool for evaluating RNA seq mapping☆22Updated 6 years ago
- ☆16Updated 2 years ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆33Updated 3 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 8 months ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 5 months ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- Immuological gene typing and annotation for genome assembly☆38Updated 10 months ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago