Integrative analysis of structural variations.
☆41Dec 20, 2023Updated 2 years ago
Alternatives and similar repositories for intansv
Users that are interested in intansv are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Nov 4, 2021Updated 4 years ago
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆14Oct 10, 2022Updated 3 years ago
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Apr 11, 2025Updated last year
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45May 15, 2025Updated last year
- QTL mapping with binmap data☆18May 18, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CNV detection tool for targeted NGS panel data☆16Feb 28, 2022Updated 4 years ago
- A Data Fusion Method for Multi Source (VCF4.0+) Structural Variation Analysis☆23Feb 4, 2025Updated last year
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Jun 11, 2026Updated 3 weeks ago
- R package designed to simplify structural variant analysis☆74Dec 22, 2021Updated 4 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated 11 months ago
- Population-wide Deletion Calling☆35Apr 16, 2025Updated last year
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆34Aug 18, 2025Updated 10 months ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆14Apr 9, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Jun 6, 2024Updated 2 years ago
- Structural variant (SV) analysis tools☆41Jul 1, 2024Updated 2 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆49Jun 2, 2020Updated 6 years ago
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated last year
- Computes various SV statistics☆14Oct 12, 2023Updated 2 years ago
- Tools for processing and analyzing structural variants.☆157May 2, 2022Updated 4 years ago
- ☆51Aug 27, 2019Updated 6 years ago
- sort genomic data☆36Nov 7, 2025Updated 7 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- lumpy: a general probabilistic framework for structural variant discovery☆343Feb 22, 2026Updated 4 months ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆60Apr 27, 2026Updated 2 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆38Jul 1, 2024Updated 2 years ago
- Deep learning-based structural variant filtering method☆40Nov 19, 2023Updated 2 years ago
- v2.x of the microassembly based somatic variant caller☆29Updated this week
- an R/shiny application for creation of Circos plot interactively☆155Sep 25, 2022Updated 3 years ago
- a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads☆235Feb 17, 2022Updated 4 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆31Jun 20, 2026Updated last week
- GRIDSS: the Genomic Rearrangement IDentification Software Suite☆285May 21, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A pipeline for genomic variant detection with genome assemblies at population scale☆40Jun 3, 2025Updated last year
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆28Jul 26, 2024Updated last year
- Pipeline for generating RNAseq-based cancer patient reports☆13Jun 11, 2026Updated 3 weeks ago
- ☆33Jun 10, 2026Updated 3 weeks ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Jun 22, 2026Updated last week
- Characterization of Structural Variation in Chinese samples☆17Dec 22, 2021Updated 4 years ago
- structural variant database software☆49May 28, 2026Updated last month