Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
☆102Nov 5, 2020Updated 6 years ago
Alternatives and similar repositories for parliament2
Users that are interested in parliament2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆49Jun 2, 2020Updated 6 years ago
- Toolset for SV simulation, comparison and filtering☆425Dec 1, 2023Updated 2 years ago
- structural variant calling and genotyping with existing tools, but, smoothly.☆266Jun 17, 2024Updated 2 years ago
- Tools for processing and analyzing structural variants.☆158May 2, 2022Updated 4 years ago
- Structural variant merging tool☆58Aug 23, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆12Oct 13, 2021Updated 5 years ago
- Tools for the analysis of structural variation in genomes☆81Feb 23, 2026Updated 8 months ago
- ☆85Mar 3, 2025Updated last year
- ☆51Aug 27, 2019Updated 7 years ago
- Pipeline for structural variant image curation and analysis.☆49Dec 5, 2021Updated 4 years ago
- Plot structural variant signals from many BAMs and CRAMs☆574Jul 13, 2024Updated 2 years ago
- Support Vector Structural Variation Genotyper☆59May 29, 2020Updated 6 years ago
- for visual evaluation of read support for structural variation☆56Jun 4, 2024Updated 2 years ago
- Kmer based genotyper for short reads.☆23Oct 19, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Segmental Duplication Assembler (SDA).☆44May 7, 2023Updated 3 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Feb 12, 2022Updated 4 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆109Dec 14, 2020Updated 5 years ago
- Structural Variant Index☆77Jul 1, 2026Updated 4 months ago
- Read visualizer for structural variants☆85Aug 18, 2018Updated 8 years ago
- ☆13Jun 21, 2017Updated 9 years ago
- Structural variation and indel detection by local assembly☆258Aug 19, 2026Updated 2 months ago
- Updated figures for "A benchmarking of WGS-based structural variant callers" paper☆27Apr 3, 2022Updated 4 years ago
- Graph realignment tools for structural variants☆172Dec 8, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- Structural variant detection and association testing☆109Feb 2, 2023Updated 3 years ago
- This is the Haplotypo repository☆22May 24, 2024Updated 2 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆73Sep 4, 2024Updated 2 years ago
- Structural variant caller☆55Dec 8, 2021Updated 4 years ago
- Structural variant and indel caller for mapped sequencing data☆467Oct 11, 2025Updated last year
- Comprehensive benchmark of structural variant callers☆49Feb 4, 2021Updated 5 years ago
- genetic variant expressions, annotation, and filtering for great good.☆274May 12, 2026Updated 5 months ago
- Calling deletions using deep convolutional neural