Nextomics / nextsvLinks
☆36Updated last year
Alternatives and similar repositories for nextsv
Users that are interested in nextsv are comparing it to the libraries listed below
Sorting:
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- ☆31Updated 5 years ago
- ☆42Updated last year
- ☆77Updated 5 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- ☆48Updated last year
- Variant annotation and merging pipeline☆39Updated 2 months ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Updated 6 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- An easy way to run BioNano genomic analysis☆28Updated 4 years ago
- SV genotyping with long reads☆39Updated 2 years ago
- Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.☆32Updated 3 years ago
- ☆81Updated 6 months ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- Structural variant caller☆55Updated 3 years ago
- ☆31Updated last year
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated 2 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago
- Draw a dot plot from a paf alignment☆34Updated last month
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 8 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- methods for orphan gene prediction paper optimization☆25Updated 3 years ago
- ☆36Updated last month
- Method to optimally select samples for validation and resequencing☆28Updated 4 years ago
- ☆30Updated 8 months ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆49Updated 6 months ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago