SunXQlab / ESICCCLinks
ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods
☆12Updated last year
Alternatives and similar repositories for ESICCC
Users that are interested in ESICCC are comparing it to the libraries listed below
Sorting:
- ☆31Updated 7 months ago
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆21Updated 3 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆12Updated last year
- ☆14Updated 11 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆39Updated 8 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- ☆30Updated 5 months ago
- Identifying external communication signals using single-cell transcriptomics data☆20Updated last year
- ☆45Updated last year
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 7 months ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 7 months ago
- ☆18Updated 3 months ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆61Updated last year
- Supplementary files and notebooks to recreate figures.☆19Updated 2 months ago
- ☆27Updated last month
- ☆14Updated 4 months ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆56Updated 5 months ago
- Publically accessible code for DIISCO method☆12Updated 11 months ago
- a simple R data package for curated cancer pathway-specific gene lists☆12Updated 5 years ago
- ☆12Updated last month
- ☆21Updated 6 months ago
- scTM: A package for topic modelling in transcriptomics data☆22Updated last year
- CAST package☆40Updated 11 months ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 7 months ago
- Python implementation of Gene Trajectory☆27Updated last year
- ☆31Updated 2 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Updated 3 years ago