☆37Jul 27, 2026Updated 2 weeks ago
Alternatives and similar repositories for CFGen
Users that are interested in CFGen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A model developed for the generation of scRNA-seq data☆94Jan 21, 2026Updated 6 months ago
- Diffusion Model for Single-Cell Multiome Data Generation and Analysis☆42May 19, 2026Updated 2 months ago
- ☆21Nov 12, 2025Updated 8 months ago
- Modeling complex perturbations with CellFlow☆153Aug 3, 2026Updated last week
- [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model☆25Mar 12, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆62May 30, 2024Updated 2 years ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆72Aug 3, 2026Updated last week
- ☆20Jun 11, 2026Updated last month
- Causal Differential Networks (ICML 2025)☆16Jun 3, 2025Updated last year
- Toolbox for single-cell data analysis on sample level☆25Aug 3, 2026Updated last week
- ICLR 2026 AI-aided Drug Discovery Paper Selection☆17Jan 30, 2026Updated 6 months ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 9 months ago
- GENOT: Generative Neural Optimal Transport☆17Dec 18, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments☆19Aug 12, 2025Updated 11 months ago
- ☆10Dec 11, 2024Updated last year
- [NPJ AI] A foundation model for individual genome modelling☆27May 9, 2026Updated 3 months ago
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆51Jun 5, 2025Updated last year
- ☆99Aug 12, 2024Updated last year
- MaxToki: an autoregressive single-cell language model built on BioNeMo/NeMo/Megatron.☆28Jul 28, 2026Updated last week
- Learning motif contributions to cell transitions using sequence features and graphs.☆27Aug 30, 2024Updated last year
- Equivariant layers for RC-complement symmetry in DNA sequence data☆13Feb 24, 2022Updated 4 years ago
- CONCERT predicts niche-aware perturbation responses in spatial transcriptomics☆24Nov 13, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆29Apr 15, 2026Updated 3 months ago
- Tahoe-x1 is a single cell foundation model designed for gigascale datasets☆163Jun 3, 2026Updated 2 months ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆39Jul 29, 2025Updated last year
- A benchmark on predicting how small molecules change gene expression in different cell types.☆18Jul 4, 2025Updated last year
- ChromBERT: A pre-trained foundation model for context-specific transcription regulatory network☆22Mar 24, 2026Updated 4 months ago
- ☆18Oct 17, 2024Updated last year
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 4 months ago
- physics-informed neural network based method for solving single-cell population dynamics☆17Jun 23, 2026Updated last month
- scDFM: Distributional Flow Matching for Robust Single-Cell Perturbation Prediction (ICLR 2026)☆44Apr 22, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆132Oct 31, 2024Updated last year
- Benchmarking pipeline for single-cell perturbation prediction tools☆34Jul 11, 2025Updated last year
- ☆58Apr 7, 2026Updated 4 months ago
- deep learning-inspired explainable sequence model for transcription initiation☆106Mar 3, 2025Updated last year
- Pytorch implementation of EpiFoundation☆26Feb 25, 2025Updated last year
- Read/write functions to and from spatialdata for Deep Visual Proteomics☆20Jul 29, 2026Updated last week
- A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.☆28Jan 3, 2025Updated last year