Spencerfar / LatentVeloLinks
☆24Updated 2 years ago
Alternatives and similar repositories for LatentVelo
Users that are interested in LatentVelo are comparing it to the libraries listed below
Sorting:
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆25Updated 10 months ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆13Updated last year
- ☆59Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆36Updated last year
- ☆48Updated 5 months ago
- ☆60Updated 2 years ago
- Co-accessibility network from single-cell ATAC-seq data. Python code with AnnData, based on Cicero algorithm.☆22Updated last week
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆37Updated 7 months ago
- ☆45Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆67Updated 2 years ago
- ☆13Updated 2 months ago
- ☆61Updated last month
- ☆124Updated last year
- ☆45Updated last month
- Accelerated, Python-only, single-cell integration benchmarking metrics☆72Updated this week
- ☆50Updated 3 months ago
- End-to-end analysis of spatial multi-omics data☆93Updated last month
- ☆40Updated last week
- A deep learning architecture for robust inference and accurate prediction of cellular dynamics☆68Updated last month
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 7 months ago
- Python implementation of Milo for differential abundance testing on KNN graph☆74Updated 6 months ago
- ☆26Updated last year
- TACCO: Transfer of Annotations to Cells and their COmbinations☆55Updated last week
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated 10 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆45Updated last year
- Cell cycle inference in single-cell RNA-seq☆50Updated 2 years ago
- Developmental Spatiotemporal Optimal Transport☆11Updated 5 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆94Updated 6 months ago
- Predict RNA velocity through deep learning☆70Updated last year