Spencerfar / LatentVelo
☆23Updated last year
Alternatives and similar repositories for LatentVelo:
Users that are interested in LatentVelo are comparing it to the libraries listed below
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆18Updated 4 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆22Updated 3 months ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆42Updated last year
- ☆45Updated 2 years ago
- Co-accessibility network from single-cell ATAC-seq data. Python code, based on Cicero package (R).☆19Updated last week
- Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.☆45Updated last month
- End-to-end analysis of spatial multi-omics data☆39Updated this week
- ☆35Updated last year
- inferring regulatory cellular dynamics☆34Updated last month
- Spatial direct messaging detected by bivariate Moran☆25Updated last month
- Additional code and analysis from the single-cell integration benchmarking project☆57Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 7 months ago
- ☆26Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆30Updated 2 weeks ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆11Updated 10 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- ☆39Updated last week
- Predict RNA velocity through deep learning☆66Updated last year
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆60Updated 9 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated 3 months ago
- ☆44Updated 9 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated last year
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆12Updated last year
- ☆44Updated 4 months ago
- spatial transcriptome, single cell☆67Updated last year
- ☆52Updated 6 months ago
- Bayesian Analytics for Spatial Segmentation☆25Updated 4 months ago
- Template repository for creating novel models with scvi-tools☆19Updated 2 years ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- Spatial reconstruction of dissociated single-cell data☆17Updated last year