Alternatives and similar repositories for LatentVelo

Users that are interested in LatentVelo are comparing it to the libraries listed below

• WPZgithub / CEFCON
  Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data
  ☆25Updated 10 months ago
• dpeerlab / ENVI
  ☆50Updated 3 months ago
• tabdelaal / SpaGE
  Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data
  ☆36Updated last year
• yutongo / TIGON
  ☆48Updated 5 months ago
• ma-compbio / GAGE-seq
  Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq
  ☆13Updated last year
• StatBiomed / UniTVelo
  UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference
  ☆26Updated 9 months ago
• Lotfollahi-lab / nichecompass
  End-to-end analysis of spatial multi-omics data
  ☆90Updated 2 weeks ago
• KlugerLab / SIMVI
  ☆13Updated last month
• wanglab-broad / CAST
  CAST package
  ☆40Updated 9 months ago
• simonwm / tacco
  TACCO: Transfer of Annotations to Cells and their COmbinations
  ☆52Updated last year
• theislab / scib-reproducibility
  Additional code and analysis from the single-cell integration benchmarking project
  ☆66Updated 2 years ago
• YingMa0107 / IRIS
  Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics
  ☆37Updated 6 months ago
• prabhakarlab / Banksy_py
  ☆58Updated 3 weeks ago
• zcang / SpaOTsc
  ☆45Updated last month
• YosefLab / velovi
  ☆40Updated last week
• xiaoyeye / TFvelo
  ☆45Updated last year
• QuKunLab / SPACEL
  ☆59Updated last year
• AllonKleinLab / cospar
  ☆26Updated last year
• MarioniLab / sagenet
  Spatial reconstruction of dissociated single-cell data
  ☆19Updated last year
• bowang-lab / DeepVelo
  ☆46Updated last year
• StatBiomed / SpatialDM
  Spatial direct messaging detected by bivariate Moran
  ☆27Updated last month
• cantinilab / Circe
  Co-accessibility network from single-cell ATAC-seq data. Python code with AnnData, based on Cicero algorithm.
  ☆22Updated 2 months ago
• LiHongCSBLab / SOAPy
  ☆31Updated 6 months ago
• yzf072 / spaTrack
  An optimal transport-based algorithm for inferring cell trajectories of spatial transcriptomics.
  ☆26Updated 4 months ago
• zhoux85 / STAligner
  STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.
  ☆45Updated last year
• huidongchen / simba
  SIMBA: SIngle-cell eMBedding Along with features
  ☆19Updated last year
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆70Updated last year
• andreariba / DeepCycle
  Cell cycle inference in single-cell RNA-seq
  ☆48Updated 2 years ago
• SydneyBioX / scJoint
  ☆60Updated 2 years ago
• LiQian-XC / sctour
  A deep learning architecture for robust inference and accurate prediction of cellular dynamics
  ☆67Updated last month