☆25Aug 15, 2023Updated 2 years ago
Alternatives and similar repositories for LatentVelo
Users that are interested in LatentVelo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated last year
- A deep learning architecture for robust inference and accurate prediction of cellular dynamics☆80Jul 20, 2025Updated 9 months ago
- Bayesian model for RNA velocity estimation of periodic manifolds☆35Jun 25, 2024Updated last year
- Create PyTorch Datasets from AnnData☆21Jan 6, 2026Updated 4 months ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Learning cell fate landscapes from spatial transcriptomics using Fused Gromov-Wasserstein☆27Oct 21, 2025Updated 6 months ago
- Dynamical information enables inference of gene regulation at single-cell scale☆12Jun 9, 2025Updated 11 months ago
- RNA velocity validation☆22Mar 16, 2022Updated 4 years ago
- Predict RNA velocity through deep learning☆73Dec 12, 2023Updated 2 years ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆28Nov 12, 2024Updated last year
- ☆46May 4, 2024Updated 2 years ago
- Code repository for macsGESTALT single cell lineage tracing analysis https://doi.org/10.1101/2020.08.11.245787☆10May 10, 2021Updated 5 years ago
- CellPolaris☆14Jan 11, 2026Updated 4 months ago
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- scVI extension for unspliced RNA☆15May 18, 2025Updated 11 months ago
- ☆58Mar 23, 2025Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆44Feb 19, 2026Updated 2 months ago
- trajectory inference☆109Jan 27, 2025Updated last year
- Adapting Dense Matching for Homography Estimation with Grid-based Acceleration (CVPR'25)☆23Jan 15, 2026Updated 3 months ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆20May 22, 2021Updated 4 years ago
- Graphical modelling with time series data using an ODE model☆12Mar 28, 2022Updated 4 years ago
- Pytorch implementation of DiffGlue for ACM MM'24 paper "DiffGlue: Diffusion-Aided Image Feature Matching", by Shihua Zhang and Jiayi Ma.☆26Dec 12, 2024Updated last year
- ☆17Mar 5, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆11Nov 24, 2022Updated 3 years ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆27Aug 30, 2024Updated last year
- ☆12Oct 23, 2023Updated 2 years ago
- Multi-omic velocity inference☆118Oct 23, 2024Updated last year
- Cell cycle inference in single-cell RNA-seq☆52Apr 25, 2023Updated 3 years ago
- ☆26Dec 10, 2025Updated 5 months ago
- 𝒫robabilistic modeling of RNA velocity ⬱☆49Updated this week
- Non-parametric density inference for single-cell analysis.☆73Apr 10, 2026Updated last month
- Code & utilities for the manuscript "Lineage Recording Reveals the Phylodynamics, Plasticity and Paths of Tumor Evolution"☆14May 27, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.☆86Mar 20, 2025Updated last year
- This is the alpha version of the CellOracle package☆451Apr 30, 2026Updated last week
- Developmental Spatiotemporal Optimal Transport☆14Mar 19, 2025Updated last year
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆44Sep 18, 2025Updated 7 months ago
- Deep Generative Modeling of RNA Velocity☆38Oct 21, 2025Updated 6 months ago
- Pytorch implementation of ConvMatch for AAAI'23 paper "ConvMatch: Rethinking Network Design for Two-View Correspondence Learning"☆28May 11, 2024Updated 2 years ago
- The Monod package fits CME models to sequencing data.☆32Apr 24, 2026Updated 2 weeks ago