A Framework for IMS-MS Raw Data Processing written in Rust and Python.
☆24Oct 15, 2026Updated 2 weeks ago
Alternatives and similar repositories for rustims
Users that are interested in rustims are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TimsR: Easy access to timsTOF Pro data from R.☆12May 11, 2021Updated 5 years ago
- Agentic plugins to annotate SDRF using Claude; Codex; Cursor; Gemini☆19Updated this week
- Proteomics search & quantification so fast that it feels like magic☆317Oct 22, 2026Updated last week
- ☆39Oct 23, 2026Updated last week
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Oct 7, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆22Jun 28, 2021Updated 5 years ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Aug 19, 2026Updated 2 months ago
- ☆45Updated this week
- Infrastructure of AlphaX ecosystem☆60Updated this week
- C# Mass Spectrometry Library☆41Jun 14, 2022Updated 4 years ago
- GlyCombo, a combinatorial glycan composition assignment tool☆13May 4, 2026Updated 5 months ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆109Oct 23, 2026Updated last week
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆98Jun 3, 2026Updated 4 months ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆52Oct 23, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A repository of datasets in ProteomeXchange annotated in SDRF, previously part of the specification☆16Updated this week
- A python package for fast post translational modification localization, powered by Cython.☆21Dec 15, 2023Updated 2 years ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆14Aug 20, 2026Updated 2 months ago
- Old development repository (outdated)☆14Aug 27, 2018Updated 8 years ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆64Jul 15, 2026Updated 3 months ago
- ☆16May 27, 2026Updated 5 months ago
- An open-source Python package to unify raw MS data accession and storage.☆36Aug 31, 2026Updated last month
- HUPO-PSI mass spectrometry CV☆42Updated this week
- Fast analysis of DIA proteomics experiments☆22Oct 20, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- DART-ID: retention time alignment and peptide identification confidence updates☆19Mar 17, 2025Updated last year
- A python package for protein inference in Mass Spectrometric data analysis.☆10Jun 6, 2022Updated 4 years ago
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated 2 years ago
- Peptide coefficient predictor☆10Oct 19, 2022Updated 4 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆32Jul 16, 2026Updated 3 months ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆69Oct 12, 2026Updated 2 weeks ago
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆18Oct 21, 2026Updated last week
- LIMPA DAVIS Proteomics Pipeline☆22Updated this week
- Links between modalities in mudata☆17Oct 16, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆25Apr 1, 2026Updated 6 months ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆48Oct 23, 2026Updated last week
- ☆49Mar 14, 2025Updated last year
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆59Oct 23, 2026Updated last week
- Python module for lipidomics LC MS/MS data analysis☆22Jun 27, 2024Updated 2 years ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆34Mar 27, 2026Updated 7 months ago
- Data Processing Kitchen Sink for proteomics data☆16Jun 15, 2026Updated 4 months ago