LeidelLab / SMITER
Synthetic mzML writer
☆13Updated last month
Alternatives and similar repositories for SMITER:
Users that are interested in SMITER are comparing it to the libraries listed below
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆28Updated last month
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆21Updated 3 months ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆39Updated 4 months ago
- A programmable and modular LC/MS simulator in Python☆22Updated 2 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated last month
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- HUPO-PSI Standardized peptidoform notation☆17Updated last year
- ☆32Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated 5 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated last week
- A library for deisotoping and charge state deconvolution of complex mass spectra☆36Updated 3 months ago
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- ☆23Updated 6 months ago
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆20Updated 3 months ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆60Updated last month
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 9 months ago
- ☆23Updated last month
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆19Updated 5 months ago
- ☆14Updated 2 years ago
- ☆18Updated 2 months ago
- The Multiplierz Proteomics Library☆24Updated 11 months ago
- HUPO-PSI mass spectrometry CV☆30Updated this week
- Streamlining Mass Spectrometry Data Visualization with Pandas☆14Updated last month
- Instrument Application Programming Interface☆46Updated 2 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆43Updated 7 months ago
- A Python interface to proteomics data repositories☆34Updated last month
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 9 months ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆44Updated last month
- Community-curated tutorials and datasets for ML in proteomics☆52Updated 3 weeks ago
- ☆18Updated 11 months ago