☆29May 20, 2025Updated last year
Alternatives and similar repositories for timsrust
Users that are interested in timsrust are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆47Updated this week
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆52May 15, 2026Updated last week
- A Framework for IMS-MS Raw Data Processing written in Rust and Python.☆19May 12, 2026Updated last week
- CLI toolkit for fast analysis of DIA proteomics experiments and in silico library prediction☆21Updated this week
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Proteomics search & quantification so fast that it feels like magic☆289May 8, 2026Updated last week
- High quality in silico spectral library generation for data-independent acquisition proteomics☆22Mar 31, 2026Updated last month
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Mar 25, 2026Updated last month
- A diaPASEF spectrum-centric analysis tool☆14Mar 23, 2026Updated last month
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆95Mar 18, 2026Updated 2 months ago
- ☆40May 13, 2026Updated last week
- MS/MS prediction for peptides☆24Dec 18, 2020Updated 5 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31May 13, 2026Updated last week
- Infrastructure of AlphaX ecosystem☆54May 6, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Python interface to proteomics data repositories☆37Jun 19, 2025Updated 11 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆61Mar 19, 2026Updated 2 months ago
- A modular, python-based framework for mass spectrometry. Powered by nbdev.☆187Apr 19, 2024Updated 2 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆51Feb 27, 2025Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆32Apr 13, 2026Updated last month
- EuBIC-MS Developers Meeting 2025 on Computational Mass Spectrometry☆11Nov 8, 2024Updated last year
- ☆69Mar 17, 2025Updated last year
- ☆38Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54May 14, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Data Processing Kitchen Sink for proteomics data☆13Updated this week
- ☆31Apr 28, 2026Updated 3 weeks ago
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆155May 11, 2026Updated last week
- EasyPQP: Simple library generation for OpenSWATH☆11Apr 21, 2026Updated last month
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Apr 22, 2026Updated last month
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Oct 23, 2022Updated 3 years ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆110Updated this week
- Library for mass spectrometry projects☆26Updated this week
- ☆46Mar 14, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Spectral library searching using approximate nearest neighbor techniques.☆49Feb 11, 2026Updated 3 months ago
- A cross-platform proteomics data analysis suite☆295May 11, 2026Updated last week
- ☆24Feb 26, 2023Updated 3 years ago
- Computational analysis for mass spectrometry-based proteomics data☆20Feb 22, 2026Updated 3 months ago
- Deep learning framework for proteomics☆152Apr 21, 2026Updated last month
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆94Nov 17, 2025Updated 6 months ago
- Python client for PRIDE Archive Rest API.☆40May 4, 2026Updated 2 weeks ago