MannLabs / timsrust
☆24Updated this week
Alternatives and similar repositories for timsrust:
Users that are interested in timsrust are comparing it to the libraries listed below
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆43Updated this week
- A rust library for parsing Pro Forma peptides and matching them against MS spectra☆17Updated this week
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated last month
- ☆34Updated this week
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆43Updated this week
- Rescoring and spectral library generation pipeline for proteomics.☆37Updated 2 weeks ago
- An open-source Python package to unify raw MS data accession and storage.☆18Updated 4 months ago
- Instrument Application Programming Interface☆45Updated last month
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆45Updated this week
- A Python interface to proteomics data repositories☆32Updated 8 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆21Updated last week
- A python package for fast post translational modification localization, powered by Cython.☆18Updated last year
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- Democratizing ML in proteomics☆33Updated this week
- HUPO-PSI Standardized peptidoform notation☆15Updated 11 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆26Updated last month
- A diaPASEF spectrum-centric analysis tool☆12Updated 6 months ago
- ☆14Updated 2 years ago
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated 3 weeks ago
- ☆25Updated last year
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆40Updated this week
- Open-source C++ and Python module for opening binary timsTOF data files.☆44Updated last month
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆34Updated this week
- Python package for investigating the structural context of PTMs☆28Updated last week
- modular & open DIA search☆57Updated this week
- Python framework for Deep Learning in Proteomics☆23Updated this week
- ☆14Updated this week
- ☆13Updated 10 months ago
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Updated 2 years ago
- A python interface to the SAGE search engine for mass spectrometry proteomics☆11Updated last week