PNNL-Comp-Mass-Spec / Informed-ProteomicsLinks
Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
☆31Updated 2 years ago
Alternatives and similar repositories for Informed-Proteomics
Users that are interested in Informed-Proteomics are comparing it to the libraries listed below
Sorting:
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆22Updated 2 months ago
- Instrument Application Programming Interface☆51Updated last week
- Thermo MSFileReader Python bindings☆69Updated 4 years ago
- ☆28Updated 4 months ago
- Mass spectrometry data visualization☆37Updated 4 years ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆65Updated 2 years ago
- MSDK source code repository☆40Updated 3 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 3 years ago
- C# Mass Spectrometry Library☆37Updated 3 years ago
- ☆13Updated last year
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- ☆39Updated 6 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 6 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 3 weeks ago
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Updated 3 years ago
- HUPO-PSI mass spectrometry CV☆34Updated last week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated this week
- Open-source C++ and Python module for opening binary timsTOF data files.☆49Updated 3 months ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆42Updated 3 weeks ago
- ☆22Updated 4 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆45Updated 6 months ago
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Updated 4 years ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆59Updated last month
- Computational analysis for mass spectrometry-based proteomics data☆20Updated 4 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last year
- Interpretation of proteomics identification results☆51Updated last month
- Libraries for fine isotopic structure calculator.☆40Updated 2 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 6 months ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated last month
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆102Updated last week