Nesvilab / diaTracerView external linksLinks
A diaPASEF spectrum-centric analysis tool
☆13Dec 24, 2025Updated last month
Alternatives and similar repositories for diaTracer
Users that are interested in diaTracer are comparing it to the libraries listed below
Sorting:
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆50Updated this week
- ☆27May 20, 2025Updated 8 months ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆40Updated this week
- modular & open DIA search☆103Updated this week
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆22Jan 19, 2025Updated last year
- Fundamentals public repo☆12Feb 5, 2026Updated last week
- An easy-to-use and interactive web application for FragPipe☆14Jul 28, 2025Updated 6 months ago
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- High quality in silico spectral library generation for data-independent acquisition proteomics☆16Nov 6, 2025Updated 3 months ago
- EuBIC-MS Developers Meeting 2025 on Computational Mass Spectrometry☆11Nov 8, 2024Updated last year
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆16Dec 30, 2025Updated last month
- Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment☆24Oct 8, 2025Updated 4 months ago
- ☆31Dec 7, 2025Updated 2 months ago
- A label free quantification tool.☆18Jan 13, 2026Updated last month
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Jan 16, 2026Updated 3 weeks ago
- Paper collection about de novo peptide Sequening☆21Feb 5, 2025Updated last year
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆21Updated this week
- A tool for summarizing open search results☆16Dec 19, 2025Updated last month
- HUPO-PSI Standardized peptidoform notation☆23Nov 14, 2025Updated 3 months ago
- CLI toolkit for fast analysis of DIA proteomics experiments and in silico library prediction☆19Feb 7, 2026Updated last week
- A deep learning toolkit for mass spectrometry☆87Jan 7, 2026Updated last month
- Is a mkdocs plugin to make reproducible documentation with quarto☆20Jan 19, 2026Updated 3 weeks ago
- ☆23Mar 15, 2024Updated last year
- Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data☆26Jan 27, 2026Updated 2 weeks ago
- Computational analysis for mass spectrometry-based proteomics data☆20May 24, 2025Updated 8 months ago
- PDV: an integrative proteomics data viewer☆60Feb 5, 2026Updated last week
- Spectral library searching using approximate nearest neighbor techniques.☆48Updated this week
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Updated this week
- ☆40Jan 20, 2026Updated 3 weeks ago
- Proteomics search & quantification so fast that it feels like magic☆270Jan 6, 2026Updated last month
- ☆30Oct 2, 2023Updated 2 years ago
- A Python package for amino acid sequence analysis. Proforma 2.1 complicant.☆14Feb 6, 2026Updated last week
- A cross-platform proteomics data analysis suite☆276Updated this week
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆94Feb 3, 2026Updated last week
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆174Jan 22, 2026Updated 3 weeks ago
- ☆13Apr 22, 2022Updated 3 years ago
- Doubly-Ranked Stratification in Mendelian Randomization☆11Jan 10, 2026Updated last month
- Repeat-injection-based quality control, batch correction, exploration, & data cleaning.☆11Updated this week
- Implementation of UniSpec, a deep learning model for predicting full fragment ion peptide spectra.☆12Feb 11, 2025Updated last year