TimsR: Easy access to timsTOF Pro data from R.
☆12May 11, 2021Updated 4 years ago
Alternatives and similar repositories for timsr
Users that are interested in timsr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Jun 28, 2021Updated 4 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Updated this week
- A Framework for IMS-MS Raw Data Processing written in Rust and Python.☆19Feb 27, 2026Updated 3 weeks ago
- GlyCombo, a combinatorial glycan composition assignment tool☆12Nov 16, 2025Updated 4 months ago
- Comparing glycoprofiles, leveraging motif substructure arithmetic☆10Jan 29, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Collisional cross-section prediction for modified and multiconformational peptides☆13Mar 18, 2026Updated last week
- An LC-MS/MS glycan and glycopeptide search engine☆14Sep 15, 2025Updated 6 months ago
- EasyPQP: Simple library generation for OpenSWATH☆11Mar 18, 2026Updated last week
- This project is a Graphical User Interface frontend for GlycoGenius, a python program that aims to be an all-in-one solution for data ana…☆15Jan 25, 2026Updated 2 months ago
- Prediction of glycopeptide fragment mass spectra by deep learning☆11Feb 20, 2024Updated 2 years ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated last month
- Mass spectrometry imaging and complementary techniques open collaboration☆20Dec 17, 2021Updated 4 years ago
- Old development repository (outdated)☆14Aug 27, 2018Updated 7 years ago
- DLL and SO from Bruker.☆12Feb 25, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆21Feb 14, 2025Updated last year
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- Tools for analysis of Mass Spectrometry data using the Wasserstein metric☆18Nov 19, 2024Updated last year
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆108Mar 18, 2026Updated last week
- Analysis of co-fractionation MS datasets☆13Dec 7, 2021Updated 4 years ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Mar 19, 2026Updated last week
- Ms2 basEd saMple vectOrization (memo) package☆17Jun 13, 2023Updated 2 years ago
- Differential Expression Analysis tool box R lang package for omics data☆47Mar 19, 2026Updated last week
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆94Mar 18, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated 2 months ago
- ☆22Sep 18, 2025Updated 6 months ago
- An open-source Python package to unify raw MS data accession and storage.☆31Mar 18, 2026Updated last week
- DeepLC: Retention time prediction for peptides carrying any modification.☆74Mar 16, 2026Updated last week
- ☆11Aug 10, 2023Updated 2 years ago
- Quantitative features for mass spectrometry data☆29Jan 9, 2026Updated 2 months ago
- Infrastructure of AlphaX ecosystem☆55Feb 27, 2026Updated 3 weeks ago
- A CLI for pairwise alignment of sequences, using both normal and mass based alignment.☆15Mar 16, 2026Updated last week
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆37Mar 18, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆63Mar 18, 2026Updated last week
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆46Updated this week
- C# Mass Spectrometry Library☆40Jun 14, 2022Updated 3 years ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Feb 27, 2026Updated 3 weeks ago
- Picotti lab data analysis package.☆66Mar 3, 2026Updated 3 weeks ago
- ☆28May 20, 2025Updated 10 months ago
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆15Oct 6, 2023Updated 2 years ago