Alternatives and similar repositories for old-mzmine3

Users that are interested in old-mzmine3 are comparing it to the libraries listed below

• pnnl / MSAC
  ☆23Updated 10 months ago
• zhengfj1994 / PPGB_MS2
  ☆11Updated last year
• neilswainston / FragGenie
  ☆15Updated 4 years ago
• pnnl / deimos
  ☆36Updated last month
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆17Updated last year
• CompOmics / IM2Deep
  Collisional cross-section prediction for modified and multiconformational peptides
  ☆13Updated last week
• ipb-halle / MetFrag
  Repo hosting the MetFrag website
  ☆10Updated last year
• PHOENIXcenter / deeprtalign
  a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
  ☆15Updated 2 years ago
• biorack / blink
  ☆12Updated last year
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated last year
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆24Updated last year
• XiminHu / mass-suite
  ☆29Updated last year
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 3 years ago
• MatteoLacki / IsoSpec
  Libraries for fine isotopic structure calculator.
  ☆41Updated last month
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆10Updated 2 months ago
• coongroup / LipiDex
  Lipid identification software for discovery LC-MS/MS
  ☆12Updated 6 years ago
• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆16Updated 3 weeks ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 3 weeks ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆30Updated 3 months ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆15Updated 2 years ago
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• bittremieuxlab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆33Updated 3 weeks ago
• NLeSC / MAGMa
  eMetabolomics project: Mass Annotation based on in silico Generated Metabolites
  ☆15Updated 3 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆34Updated last month
• oolonek / ISDB
  A database of In-Silico predicted MS/MS spectrum of Natural Products
  ☆15Updated 3 years ago
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆25Updated 9 months ago
• domdfcoding / pynist
  PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.
  ☆22Updated last week
• CSi-Studio / G-Aligner
  G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics
  ☆17Updated last year
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated 2 years ago