Alternatives and similar repositories for mzLib

Users that are interested in mzLib are comparing it to the libraries listed below

• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆23Updated 4 months ago
• dbaileychess / CSMSL
  C# Mass Spectrometry Library
  ☆38Updated 3 years ago
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆51Updated 2 months ago
• thermofisherlsms / RawFileReader
  ☆64Updated 9 months ago
• smith-chem-wisc / MetaMorpheus
  Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
  ☆104Updated 3 weeks ago
• PNNL-Comp-Mass-Spec / DeconTools
  Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.
  ☆19Updated last month
• Noble-Lab / Carafe
  High quality in silico spectral library generation for data-independent acquisition proteomics
  ☆16Updated last month
• mafreitas / tdf2mzml
  ☆30Updated 2 years ago
• PNNL-Comp-Mass-Spec / Informed-Proteomics
  Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
  ☆31Updated 3 years ago
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆24Updated 2 months ago
• CompOmics / ThermoRawFileParser
  Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono
  ☆232Updated last month
• tvpham / iq
  An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics
  ☆32Updated 2 months ago
• MatteoLacki / timspy
  ☆22Updated 4 years ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆45Updated 3 years ago
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆49Updated 6 months ago
• Nesvilab / MSFragger
  Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics
  ☆123Updated 5 months ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆51Updated 2 weeks ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆50Updated this week
• MannLabs / directlfq
  Fast and accurate label-free quantification for small and very large numbers of proteomes
  ☆60Updated last month
• chhh / batmass
  Mass spectrometry data visualization
  ☆37Updated 5 years ago
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆66Updated 2 years ago
• UWPR / Comet
  An tandem mass spectrometry (MS/MS) sequence database search tool.
  ☆53Updated this week
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆49Updated 9 months ago
• MannLabs / alphatims
  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…
  ☆92Updated last week
• MannLabs / timsrust
  ☆27Updated 6 months ago
• Protea-Glycosciences / GlyCombo
  GlyCombo, a combinatorial glycan composition assignment tool
  ☆12Updated last month
• CompOmics / peptide-shaker
  Interpretation of proteomics identification results
  ☆53Updated 3 weeks ago
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆39Updated this week
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• MSGFPlus / msgfplus
  MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …
  ☆81Updated last month