MIDA-group / inspireLinks
INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
☆12Updated 4 years ago
Alternatives and similar repositories for inspire
Users that are interested in inspire are comparing it to the libraries listed below
Sorting:
- Py-Alpha-AMD Registration Framework - Robust Image Registration - Public Release☆20Updated 6 years ago
- Fast global mutual information-based rigid alignment in the Fourier domain☆32Updated last year
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆261Updated last month
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆76Updated 4 years ago
- Efficient dense deformable image registration☆29Updated 2 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆53Updated last year
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆57Updated 7 months ago
- nnInteractive plugin for Napari - nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points,…☆104Updated 3 months ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆176Updated 2 months ago
- Script that registers Histology slices to volumetric image data☆11Updated 2 years ago
- Very fast greedy diffeomorphic registration code☆83Updated last month
- A napari plugin for itk-elastix☆39Updated last month
- Image registration using pytorch☆185Updated last year
- Common 2D and 3D image registration methods such as rigid, affine, and flow field for PyTorch.☆25Updated last year
- An open-source application for the analysis and visualization of segmented vasculature datasets☆128Updated last year
- Utils and convenience functions for large-scale bio-image analysis.☆60Updated last month
- Multi-modal Image Registration And Connectivity anaLysis☆48Updated 2 weeks ago
- BIRL: Benchmark on Image Registration methods with Landmark validations☆94Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆15Updated 6 years ago
- Jerman's tubular (vessel) and spherical (blob) enhancement filters☆74Updated 7 years ago
- Joint training of denoising and segmentation.☆76Updated 2 years ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆46Updated 2 months ago
- ☆89Updated last year
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆187Updated 2 weeks ago
- MATLAB Elastix wrapper☆28Updated last year
- AI-enabled Mouse Organ Segmentation☆14Updated 5 years ago
- Image, point set, and surface registration in PyTorch.☆34Updated 6 months ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆115Updated this week
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆57Updated 2 months ago