Alternatives and similar repositories for inspire

Users that are interested in inspire are comparing it to the libraries listed below

• MIDA-group / py_alpha_amd_release
  Py-Alpha-AMD Registration Framework - Robust Image Registration - Public Release
  ☆20Updated 6 years ago
• jo-mueller / Slice2Volume
  Script that registers Histology slices to volumetric image data
  ☆11Updated last year
• vessap / vessap
  Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning
  ☆74Updated 4 years ago
• InsightSoftwareConsortium / ITKElastix
  An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images
  ☆252Updated last week
• MIDA-group / globalign
  Fast global mutual information-based rigid alignment in the Fourier domain
  ☆32Updated last year
• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆39Updated last year
• MIC-DKFZ / napari-nninteractive
  ☆93Updated last month
• OSchoppe / AIMOS
  AI-enabled Mouse Organ Segmentation
  ☆13Updated 4 years ago
• RUB-Bioinf / VesselExpress
  🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
  ☆51Updated last year
• KCL-BMEIS / niftyreg
  This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…
  ☆165Updated 3 months ago
• MMV-Lab / mmv_im2im
  Python package for deep learning based image to image transformation
  ☆53Updated 3 weeks ago
• GuillaumeMougeot / biom3d
  Easy Volumetric Segmentation with Deep Learning
  ☆27Updated this week
• JacobBumgarner / VesselVio
  An open-source application for the analysis and visualization of segmented vasculature datasets
  ☆121Updated last year
• AICONSlab / MIRACL
  Multi-modal Image Registration And Connectivity anaLysis
  ☆45Updated 2 weeks ago
• Borda / BIRL
  BIRL: Benchmark on Image Registration methods with Landmark validations
  ☆93Updated 3 years ago
• simeks / deform
  Efficient dense deformable image registration
  ☆27Updated 2 years ago
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆55Updated 2 months ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated last month
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆81Updated 4 months ago
• BrancoLab / imgreg2D
  2D image registration in python, using napari.
  ☆16Updated 3 years ago
• InsightSoftwareConsortium / ITKTubeTK
  TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …
  ☆54Updated 5 months ago
• juglab / DenoiSeg
  Joint training of denoising and segmentation.
  ☆74Updated 2 years ago
• abnan / DRMIME
  DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration
  ☆46Updated 5 years ago
• AntonotnaWang / 3DCellSeg
  Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…
  ☆22Updated 2 years ago
• InsightSoftwareConsortium / ITKMontage
  Montaging for microscopy imaging files
  ☆30Updated last week
• uncbiag / mermaid
  Image registration using pytorch
  ☆183Updated last year
• SuperElastix / ElastixModelZoo
  Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix
  ☆51Updated 6 months ago
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆33Updated 2 years ago
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆31Updated 2 years ago
• InsightSoftwareConsortium / ScientificImageAnalysisVisualizationAndArtificialIntelligenceCourse
  ☆88Updated last year