MIDA-group / inspireLinks
INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
☆12Updated 4 years ago
Alternatives and similar repositories for inspire
Users that are interested in inspire are comparing it to the libraries listed below
Sorting:
- Py-Alpha-AMD Registration Framework - Robust Image Registration - Public Release☆20Updated 6 years ago
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆254Updated 3 weeks ago
- Fast global mutual information-based rigid alignment in the Fourier domain☆32Updated last year
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 4 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆51Updated last year
- ☆98Updated this week
- Joint training of denoising and segmentation.☆74Updated 2 years ago
- Script that registers Histology slices to volumetric image data☆11Updated 2 years ago
- Common 2D and 3D image registration methods such as rigid, affine, and flow field for PyTorch.☆24Updated last year
- A napari plugin for itk-elastix☆39Updated 2 weeks ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆169Updated 4 months ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆56Updated 3 months ago
- Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…☆31Updated 6 months ago
- Python package for deep learning based image to image transformation☆53Updated last month
- Very fast greedy diffeomorphic registration code☆81Updated 4 months ago
- Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images☆109Updated 5 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated 2 months ago
- BIRL: Benchmark on Image Registration methods with Landmark validations☆93Updated 3 years ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- Framework for registration of sequential digitized histology slices☆28Updated 3 years ago
- Montaging for microscopy imaging files☆30Updated last month
- Easy Volumetric Segmentation with Deep Learning☆27Updated 3 weeks ago
- Image registration using pytorch☆183Updated last year
- Multi-modal Image Registration And Connectivity anaLysis☆45Updated last month
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆103Updated this week
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆13Updated 6 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 2 months ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 2 years ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆123Updated last year
- 2D image registration in python, using napari.☆16Updated 3 years ago